Gene : Glyma.12G228100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33388:SF1 - F1K23.3 Genomic Order:  2281
Name:  ? Glyma.12G228100 Secondary Identifier:  ? PAC:30546248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G228100 0.5kb upstream 0.5kb upstream 4373 true Chr12: 38799116-38803488 Glycine max
Glyma.12G228100 0.5kb upstream 0.5kb upstream 500 false Chr12: 38802989-38803488 Glycine max
Glyma.12G228100 0.5kb downstream 0.5kb downstream 4373 true Chr12: 38798616-38802988 Glycine max
Glyma.12G228100 0.5kb downstream 0.5kb downstream 500 false Chr12: 38798616-38799115 Glycine max
Glyma.12G228100 1.0kb upstream 1.0kb upstream 4873 true Chr12: 38799116-38803988 Glycine max
Glyma.12G228100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38802989-38803988 Glycine max
Glyma.12G228100 1.0kb downstream 1.0kb downstream 4873 true Chr12: 38798116-38802988 Glycine max
Glyma.12G228100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38798116-38799115 Glycine max
Glyma.12G228100 2.0kb upstream 2.0kb upstream 5873 true Chr12: 38799116-38804988 Glycine max
Glyma.12G228100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38802989-38804988 Glycine max
Glyma.12G228100 2.0kb downstream 2.0kb downstream 5873 true Chr12: 38797116-38802988 Glycine max
Glyma.12G228100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38797116-38799115 Glycine max
Glyma.12G228100 5.0kb upstream 5.0kb upstream 8873 true Chr12: 38799116-38807988 Glycine max
Glyma.12G228100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38802989-38807988 Glycine max
Glyma.12G228100 5.0kb downstream 5.0kb downstream 8873 true Chr12: 38794116-38802988 Glycine max
Glyma.12G228100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38794116-38799115 Glycine max
Glyma.12G228100 10.0kb upstream 10.0kb upstream 13873 true Chr12: 38799116-38812988 Glycine max
Glyma.12G228100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38802989-38812988 Glycine max
Glyma.12G228100 10.0kb downstream 10.0kb downstream 13873 true Chr12: 38789116-38802988 Glycine max
Glyma.12G228100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38789116-38799115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308261 5265 Fabidae View MSA
124072979 5270 Rosid View MSA
123749696 5271 Pentapetalae View MSA
122794097 5272 Eudicot View MSA
122049695 5273 Angiosperm View MSA
121311547 5274 Embryophyte View MSA
123348830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30837 0.0 4.36344    
cufflinks 0.556922 0.0 2.00582    
cufflinks 0.270918 0.0 1.01363   Low
cufflinks 1.58965 0.0 5.14502   High
cufflinks 0.638693 0.0 2.28311    
cufflinks 0.674651 0.0 2.39739    
cufflinks 1.79352 0.0 5.74124   High
cufflinks 0.378937 0.0 1.39521   Low
cufflinks 0.636339 0.0 2.27122    
cufflinks 0.004     Low Low
cufflinks 0.119        
cufflinks 0.816        
cufflinks 0.422        
cufflinks 0.7        
cufflinks 0.125        
cufflinks 2.166        
cufflinks 0.081        
cufflinks 3.859       High
cufflinks 0.432        
cufflinks 3.148       High
cufflinks 0.125        
cufflinks 3.618       High
cufflinks 3.092       High
cufflinks 0.159        
cufflinks 2.516        
cufflinks 0.118        

0 Strain