Gene : Glyma.12G230000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF32 - TUBBY-RELATED Genomic Order:  2300
Name:  ? Glyma.12G230000 Secondary Identifier:  ? PAC:30548738
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G230000 0.5kb upstream 0.5kb upstream 5282 true Chr12: 39007582-39012863 Glycine max
Glyma.12G230000 0.5kb upstream 0.5kb upstream 500 false Chr12: 39012364-39012863 Glycine max
Glyma.12G230000 0.5kb downstream 0.5kb downstream 5282 true Chr12: 39007082-39012363 Glycine max
Glyma.12G230000 0.5kb downstream 0.5kb downstream 500 false Chr12: 39007082-39007581 Glycine max
Glyma.12G230000 1.0kb upstream 1.0kb upstream 5782 true Chr12: 39007582-39013363 Glycine max
Glyma.12G230000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39012364-39013363 Glycine max
Glyma.12G230000 1.0kb downstream 1.0kb downstream 5782 true Chr12: 39006582-39012363 Glycine max
Glyma.12G230000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39006582-39007581 Glycine max
Glyma.12G230000 2.0kb upstream 2.0kb upstream 6782 true Chr12: 39007582-39014363 Glycine max
Glyma.12G230000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39012364-39014363 Glycine max
Glyma.12G230000 2.0kb downstream 2.0kb downstream 6782 true Chr12: 39005582-39012363 Glycine max
Glyma.12G230000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39005582-39007581 Glycine max
Glyma.12G230000 5.0kb upstream 5.0kb upstream 9782 true Chr12: 39007582-39017363 Glycine max
Glyma.12G230000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39012364-39017363 Glycine max
Glyma.12G230000 5.0kb downstream 5.0kb downstream 9782 true Chr12: 39002582-39012363 Glycine max
Glyma.12G230000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39002582-39007581 Glycine max
Glyma.12G230000 10.0kb upstream 10.0kb upstream 14782 true Chr12: 39007582-39022363 Glycine max
Glyma.12G230000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39012364-39022363 Glycine max
Glyma.12G230000 10.0kb downstream 10.0kb downstream 14782 true Chr12: 38997582-39012363 Glycine max
Glyma.12G230000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38997582-39007581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308151 5265 Fabidae View MSA
124061146 5270 Rosid View MSA
123740168 5271 Pentapetalae View MSA
122785762 5272 Eudicot View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9878 0.0 53.3304    
cufflinks 16.1827 0.0 43.3513   Low
cufflinks 15.2891 0.0 41.0486   Low
cufflinks 26.2422 0.0 70.1694 High High
cufflinks 18.2257 0.0 48.6496    
cufflinks 20.58 0.0 54.9051    
cufflinks 19.2918 0.0 51.4784    
cufflinks 30.4338 0.0 81.7656 High High
cufflinks 20.8825 0.0 55.712 High  
cufflinks 4.517        
cufflinks 7.09     High High
cufflinks 3.659        
cufflinks 2.208       Low
cufflinks 1.978       Low
cufflinks 5.706     High  
cufflinks 4.263        
cufflinks 4.533        
cufflinks 3.662        
cufflinks 4.64        
cufflinks 4.673        
cufflinks 5.79     High  
cufflinks 4.351        
cufflinks 4.138        
cufflinks 6.908     High High
cufflinks 3.852        
cufflinks 4.046        

0 Strain