Gene : Glyma.12G230200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR26374:SF167 - TRANSCRIPTIONAL REGULATOR SUPERMAN Genomic Order:  2302
Name:  ? Glyma.12G230200 Secondary Identifier:  ? PAC:30547131
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G230200 0.5kb upstream 0.5kb upstream 1997 true Chr12: 39021904-39023900 Glycine max
Glyma.12G230200 0.5kb upstream 0.5kb upstream 500 false Chr12: 39021904-39022403 Glycine max
Glyma.12G230200 0.5kb downstream 0.5kb downstream 1997 true Chr12: 39022404-39024400 Glycine max
Glyma.12G230200 0.5kb downstream 0.5kb downstream 500 false Chr12: 39023901-39024400 Glycine max
Glyma.12G230200 1.0kb upstream 1.0kb upstream 2497 true Chr12: 39021404-39023900 Glycine max
Glyma.12G230200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39021404-39022403 Glycine max
Glyma.12G230200 1.0kb downstream 1.0kb downstream 2497 true Chr12: 39022404-39024900 Glycine max
Glyma.12G230200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39023901-39024900 Glycine max
Glyma.12G230200 2.0kb upstream 2.0kb upstream 3497 true Chr12: 39020404-39023900 Glycine max
Glyma.12G230200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39020404-39022403 Glycine max
Glyma.12G230200 2.0kb downstream 2.0kb downstream 3497 true Chr12: 39022404-39025900 Glycine max
Glyma.12G230200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39023901-39025900 Glycine max
Glyma.12G230200 5.0kb upstream 5.0kb upstream 6497 true Chr12: 39017404-39023900 Glycine max
Glyma.12G230200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39017404-39022403 Glycine max
Glyma.12G230200 5.0kb downstream 5.0kb downstream 6497 true Chr12: 39022404-39028900 Glycine max
Glyma.12G230200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39023901-39028900 Glycine max
Glyma.12G230200 10.0kb upstream 10.0kb upstream 11497 true Chr12: 39012404-39023900 Glycine max
Glyma.12G230200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39012404-39022403 Glycine max
Glyma.12G230200 10.0kb downstream 10.0kb downstream 11497 true Chr12: 39022404-39033900 Glycine max
Glyma.12G230200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39023901-39033900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312458 5265 Fabidae View MSA
124063773 5270 Rosid View MSA
123750895 5271 Pentapetalae View MSA
122785947 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0890371 0.0 0.356848 Low  
cufflinks 0.320962 0.0 1.22176   High
cufflinks 0.315487 0.0 1.20306   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0587794 0.0 0.240322 Low  
cufflinks 0.0138422 0.0 0.0634002 Low Low
cufflinks 0.0147885 0.0 0.0669324 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.387        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.495        
cufflinks 0.028     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain