Gene : Glyma.12G232000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15184:SF42 - ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  2320
Name:  ? Glyma.12G232000 Secondary Identifier:  ? PAC:30545847
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-7219 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G232000 0.5kb upstream 0.5kb upstream 3284 true Chr12: 39183999-39187282 Glycine max
Glyma.12G232000 0.5kb upstream 0.5kb upstream 500 false Chr12: 39183999-39184498 Glycine max
Glyma.12G232000 0.5kb downstream 0.5kb downstream 3284 true Chr12: 39184499-39187782 Glycine max
Glyma.12G232000 0.5kb downstream 0.5kb downstream 500 false Chr12: 39187283-39187782 Glycine max
Glyma.12G232000 1.0kb upstream 1.0kb upstream 3784 true Chr12: 39183499-39187282 Glycine max
Glyma.12G232000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39183499-39184498 Glycine max
Glyma.12G232000 1.0kb downstream 1.0kb downstream 3784 true Chr12: 39184499-39188282 Glycine max
Glyma.12G232000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39187283-39188282 Glycine max
Glyma.12G232000 2.0kb upstream 2.0kb upstream 4784 true Chr12: 39182499-39187282 Glycine max
Glyma.12G232000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39182499-39184498 Glycine max
Glyma.12G232000 2.0kb downstream 2.0kb downstream 4784 true Chr12: 39184499-39189282 Glycine max
Glyma.12G232000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39187283-39189282 Glycine max
Glyma.12G232000 5.0kb upstream 5.0kb upstream 7784 true Chr12: 39179499-39187282 Glycine max
Glyma.12G232000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39179499-39184498 Glycine max
Glyma.12G232000 5.0kb downstream 5.0kb downstream 7784 true Chr12: 39184499-39192282 Glycine max
Glyma.12G232000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39187283-39192282 Glycine max
Glyma.12G232000 10.0kb upstream 10.0kb upstream 12784 true Chr12: 39174499-39187282 Glycine max
Glyma.12G232000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39174499-39184498 Glycine max
Glyma.12G232000 10.0kb downstream 10.0kb downstream 12784 true Chr12: 39184499-39197282 Glycine max
Glyma.12G232000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39187283-39197282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297906 5265 Fabidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.7752 0.0 23.769    
cufflinks 4.38203 0.0 12.584    
cufflinks 2.19012 0.0 6.87588    
cufflinks 27.2185 0.0 74.1312 High High
cufflinks 1.36808 0.0 4.6252    
cufflinks 1.46712 0.0 4.89813    
cufflinks 23.2409 0.0 62.4898 High High
cufflinks 1.19743 0.0 4.10967    
cufflinks 1.14547 0.0 3.93985    
cufflinks 1.802        
cufflinks 0.156       Low
cufflinks 1.007        
cufflinks 0.321        
cufflinks 0.634        
cufflinks 0.23        
cufflinks 3.275       High
cufflinks 0.471        
cufflinks 0.745        
cufflinks 1.615        
cufflinks 4.202       High
cufflinks 0.116       Low
cufflinks 3.779       High
cufflinks 4.735       High
cufflinks 0.274        
cufflinks 3.99       High
cufflinks 0.131       Low

0 Strain