Gene : Glyma.12G232300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15238:SF3 - 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Genomic Order:  2323
Name:  ? Glyma.12G232300 Secondary Identifier:  ? PAC:30548368
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G232300 0.5kb upstream 0.5kb upstream 1795 true Chr12: 39188777-39190571 Glycine max
Glyma.12G232300 0.5kb upstream 0.5kb upstream 500 false Chr12: 39190072-39190571 Glycine max
Glyma.12G232300 0.5kb downstream 0.5kb downstream 1795 true Chr12: 39188277-39190071 Glycine max
Glyma.12G232300 0.5kb downstream 0.5kb downstream 500 false Chr12: 39188277-39188776 Glycine max
Glyma.12G232300 1.0kb upstream 1.0kb upstream 2295 true Chr12: 39188777-39191071 Glycine max
Glyma.12G232300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39190072-39191071 Glycine max
Glyma.12G232300 1.0kb downstream 1.0kb downstream 2295 true Chr12: 39187777-39190071 Glycine max
Glyma.12G232300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39187777-39188776 Glycine max
Glyma.12G232300 2.0kb upstream 2.0kb upstream 3295 true Chr12: 39188777-39192071 Glycine max
Glyma.12G232300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39190072-39192071 Glycine max
Glyma.12G232300 2.0kb downstream 2.0kb downstream 3295 true Chr12: 39186777-39190071 Glycine max
Glyma.12G232300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39186777-39188776 Glycine max
Glyma.12G232300 5.0kb upstream 5.0kb upstream 6295 true Chr12: 39188777-39195071 Glycine max
Glyma.12G232300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39190072-39195071 Glycine max
Glyma.12G232300 5.0kb downstream 5.0kb downstream 6295 true Chr12: 39183777-39190071 Glycine max
Glyma.12G232300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39183777-39188776 Glycine max
Glyma.12G232300 10.0kb upstream 10.0kb upstream 11295 true Chr12: 39188777-39200071 Glycine max
Glyma.12G232300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39190072-39200071 Glycine max
Glyma.12G232300 10.0kb downstream 10.0kb downstream 11295 true Chr12: 39178777-39190071 Glycine max
Glyma.12G232300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39178777-39188776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029878 5273 Angiosperm View MSA
122250319 5265 Fabidae View MSA
124039179 5270 Rosid View MSA
123753009 5271 Pentapetalae View MSA
122793366 5272 Eudicot View MSA
121299138 5274 Embryophyte View MSA
123428185 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03703 0.0 12.2449    
cufflinks 1.33941 0.0 6.09668    
cufflinks 0.744986 0.0 3.62798    
cufflinks 26.3958 0.0 80.0062 High High
cufflinks 0.444637 0.0 2.16312    
cufflinks 0.69978 0.0 3.53861    
cufflinks 11.5726 0.0 41.3846   High
cufflinks 0.555992 0.0 2.76413    
cufflinks 1.2273 0.0 5.80799    
cufflinks 0.283        
cufflinks 0.104       Low
cufflinks 0.719        
cufflinks 0.159        
cufflinks 0.165        
cufflinks 0.171        
cufflinks 0.901        
cufflinks 0.1       Low
cufflinks 0.495        
cufflinks 0.349        
cufflinks 1.285       High
cufflinks 0.225        
cufflinks 1.296       High
cufflinks 1.425       High
cufflinks 0.091       Low
cufflinks 1.463       High
cufflinks 0.059     Low Low

0 Strain