Gene : Glyma.12G232900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33288:SF3 - APOCYTOCHROME F Genomic Order:  2329
Name:  ? Glyma.12G232900 Secondary Identifier:  ? PAC:30545588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G232900 0.5kb upstream 0.5kb upstream 2412 true Chr12: 39192831-39195242 Glycine max
Glyma.12G232900 0.5kb upstream 0.5kb upstream 500 false Chr12: 39194743-39195242 Glycine max
Glyma.12G232900 0.5kb downstream 0.5kb downstream 2412 true Chr12: 39192331-39194742 Glycine max
Glyma.12G232900 0.5kb downstream 0.5kb downstream 500 false Chr12: 39192331-39192830 Glycine max
Glyma.12G232900 1.0kb upstream 1.0kb upstream 2912 true Chr12: 39192831-39195742 Glycine max
Glyma.12G232900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39194743-39195742 Glycine max
Glyma.12G232900 1.0kb downstream 1.0kb downstream 2912 true Chr12: 39191831-39194742 Glycine max
Glyma.12G232900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39191831-39192830 Glycine max
Glyma.12G232900 2.0kb upstream 2.0kb upstream 3912 true Chr12: 39192831-39196742 Glycine max
Glyma.12G232900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39194743-39196742 Glycine max
Glyma.12G232900 2.0kb downstream 2.0kb downstream 3912 true Chr12: 39190831-39194742 Glycine max
Glyma.12G232900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39190831-39192830 Glycine max
Glyma.12G232900 5.0kb upstream 5.0kb upstream 6912 true Chr12: 39192831-39199742 Glycine max
Glyma.12G232900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39194743-39199742 Glycine max
Glyma.12G232900 5.0kb downstream 5.0kb downstream 6912 true Chr12: 39187831-39194742 Glycine max
Glyma.12G232900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39187831-39192830 Glycine max
Glyma.12G232900 10.0kb upstream 10.0kb upstream 11912 true Chr12: 39192831-39204742 Glycine max
Glyma.12G232900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39194743-39204742 Glycine max
Glyma.12G232900 10.0kb downstream 10.0kb downstream 11912 true Chr12: 39182831-39194742 Glycine max
Glyma.12G232900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39182831-39192830 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296640 5265 Fabidae View MSA
124050483 5270 Rosid View MSA
123752202 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.0988 0.0 111.311 High High
cufflinks 6.85124 0.0 19.7582    
cufflinks 2.36802 0.0 7.83977    
cufflinks 19.3811 0.0 51.7966   High
cufflinks 1.27493 0.0 4.53059    
cufflinks 0.569756 0.0 2.12045   Low
cufflinks 10.3714 0.0 28.7411    
cufflinks 2.14435 0.0 7.27344    
cufflinks 1.61085 0.0 5.60999    
cufflinks 4.9        
cufflinks 0.152       Low
cufflinks 8.029     High  
cufflinks 0.422        
cufflinks 0.359        
cufflinks 0.371        
cufflinks 9.344     High  
cufflinks 0.755        
cufflinks 10.773     High High
cufflinks 6.614        
cufflinks 11.951     High High
cufflinks 0.238       Low
cufflinks 11.838     High High
cufflinks 6.374        
cufflinks 0.376        
cufflinks 12.91     High High
cufflinks 0.191       Low

0 Strain