Gene : Glyma.12G220400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR27003:SF94 - RECEPTOR-LIKE PROTEIN KINASE HERK 1 Genomic Order:  2204
Name:  ? Glyma.12G220400 Secondary Identifier:  ? PAC:30548197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G220400 0.5kb upstream 0.5kb upstream 3664 true Chr12: 37978471-37982134 Glycine max
Glyma.12G220400 0.5kb upstream 0.5kb upstream 500 false Chr12: 37981635-37982134 Glycine max
Glyma.12G220400 0.5kb downstream 0.5kb downstream 3664 true Chr12: 37977971-37981634 Glycine max
Glyma.12G220400 0.5kb downstream 0.5kb downstream 500 false Chr12: 37977971-37978470 Glycine max
Glyma.12G220400 1.0kb upstream 1.0kb upstream 4164 true Chr12: 37978471-37982634 Glycine max
Glyma.12G220400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37981635-37982634 Glycine max
Glyma.12G220400 1.0kb downstream 1.0kb downstream 4164 true Chr12: 37977471-37981634 Glycine max
Glyma.12G220400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37977471-37978470 Glycine max
Glyma.12G220400 2.0kb upstream 2.0kb upstream 5164 true Chr12: 37978471-37983634 Glycine max
Glyma.12G220400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37981635-37983634 Glycine max
Glyma.12G220400 2.0kb downstream 2.0kb downstream 5164 true Chr12: 37976471-37981634 Glycine max
Glyma.12G220400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37976471-37978470 Glycine max
Glyma.12G220400 5.0kb upstream 5.0kb upstream 8164 true Chr12: 37978471-37986634 Glycine max
Glyma.12G220400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37981635-37986634 Glycine max
Glyma.12G220400 5.0kb downstream 5.0kb downstream 8164 true Chr12: 37973471-37981634 Glycine max
Glyma.12G220400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37973471-37978470 Glycine max
Glyma.12G220400 10.0kb upstream 10.0kb upstream 13164 true Chr12: 37978471-37991634 Glycine max
Glyma.12G220400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37981635-37991634 Glycine max
Glyma.12G220400 10.0kb downstream 10.0kb downstream 13164 true Chr12: 37968471-37981634 Glycine max
Glyma.12G220400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37968471-37978470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302468 5265 Fabidae View MSA
124062876 5270 Rosid View MSA
123741188 5271 Pentapetalae View MSA
122788497 5272 Eudicot View MSA
122046314 5273 Angiosperm View MSA
121351522 5274 Embryophyte View MSA
123382204 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36041 0.0 7.27829    
cufflinks 2.81771 0.0 10.5932    
cufflinks 2.56215 0.0 9.82897    
cufflinks 2.69343 0.0 10.2304    
cufflinks 4.33488 0.0 14.5066    
cufflinks 24.4846 0.0 89.9059 High High
cufflinks 3.99683 0.0 13.7055    
cufflinks 3.95937 0.0 15.8165    
cufflinks 4.99084 0.0 19.162    
cufflinks 4.915       High
cufflinks 1.074       Low
cufflinks 2.062        
cufflinks 2.749        
cufflinks 2.644        
cufflinks 1.85        
cufflinks 1.713        
cufflinks 2.769        
cufflinks 1.876        
cufflinks 1.346        
cufflinks 1.667        
cufflinks 0.989       Low
cufflinks 1.581        
cufflinks 1.939        
cufflinks 0.644       Low
cufflinks 1.6        
cufflinks 1.528        

0 Strain