Gene : Glyma.12G220500 G. max Wm82.a2.v1
Genomic Order:  2205 Name:  ? Glyma.12G220500
Secondary Identifier:  ? PAC:30546792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G220500 0.5kb upstream 0.5kb upstream 1115 true Chr12: 37985499-37986613 Glycine max
Glyma.12G220500 0.5kb upstream 0.5kb upstream 500 false Chr12: 37986114-37986613 Glycine max
Glyma.12G220500 0.5kb downstream 0.5kb downstream 1115 true Chr12: 37984999-37986113 Glycine max
Glyma.12G220500 0.5kb downstream 0.5kb downstream 500 false Chr12: 37984999-37985498 Glycine max
Glyma.12G220500 1.0kb upstream 1.0kb upstream 1615 true Chr12: 37985499-37987113 Glycine max
Glyma.12G220500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37986114-37987113 Glycine max
Glyma.12G220500 1.0kb downstream 1.0kb downstream 1615 true Chr12: 37984499-37986113 Glycine max
Glyma.12G220500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37984499-37985498 Glycine max
Glyma.12G220500 2.0kb upstream 2.0kb upstream 2615 true Chr12: 37985499-37988113 Glycine max
Glyma.12G220500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37986114-37988113 Glycine max
Glyma.12G220500 2.0kb downstream 2.0kb downstream 2615 true Chr12: 37983499-37986113 Glycine max
Glyma.12G220500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37983499-37985498 Glycine max
Glyma.12G220500 5.0kb upstream 5.0kb upstream 5615 true Chr12: 37985499-37991113 Glycine max
Glyma.12G220500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37986114-37991113 Glycine max
Glyma.12G220500 5.0kb downstream 5.0kb downstream 5615 true Chr12: 37980499-37986113 Glycine max
Glyma.12G220500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37980499-37985498 Glycine max
Glyma.12G220500 10.0kb upstream 10.0kb upstream 10615 true Chr12: 37985499-37996113 Glycine max
Glyma.12G220500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37986114-37996113 Glycine max
Glyma.12G220500 10.0kb downstream 10.0kb downstream 10615 true Chr12: 37975499-37986113 Glycine max
Glyma.12G220500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37975499-37985498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309967 5265 Fabidae View MSA
124074706 5270 Rosid View MSA
123747568 5271 Pentapetalae View MSA
122796436 5272 Eudicot View MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.900439 0.0 3.45454    
cufflinks 1.56529 0.0 5.86171    
cufflinks 3.71946 0.0 13.2298    
cufflinks 6.40717 0.0 21.6296   High
cufflinks 0.286445 0.0 1.1472   Low
cufflinks 3.10727 0.0 11.1888    
cufflinks 0.385483 0.0 1.52791    
cufflinks 3.44099 0.0 12.3249    
cufflinks 0.197333 0.0 0.803939 Low Low
cufflinks 0.33        
cufflinks 0.154        
cufflinks 1.176       High
cufflinks 0.209        
cufflinks 0.217        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low Low
cufflinks 0.124        
cufflinks 1.49       High
cufflinks 1.135       High
cufflinks 0.318        
cufflinks 0.068       Low
cufflinks 0.218        
cufflinks 0.107        
cufflinks 0.123        
cufflinks 0.252        
cufflinks 0.222        

0 Strain