Gene : Glyma.12G221000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  2210
Name:  ? Glyma.12G221000 Secondary Identifier:  ? PAC:30547564
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G221000 0.5kb upstream 0.5kb upstream 3287 true Chr12: 38037272-38040558 Glycine max
Glyma.12G221000 0.5kb upstream 0.5kb upstream 500 false Chr12: 38037272-38037771 Glycine max
Glyma.12G221000 0.5kb downstream 0.5kb downstream 3287 true Chr12: 38037772-38041058 Glycine max
Glyma.12G221000 0.5kb downstream 0.5kb downstream 500 false Chr12: 38040559-38041058 Glycine max
Glyma.12G221000 1.0kb upstream 1.0kb upstream 3787 true Chr12: 38036772-38040558 Glycine max
Glyma.12G221000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38036772-38037771 Glycine max
Glyma.12G221000 1.0kb downstream 1.0kb downstream 3787 true Chr12: 38037772-38041558 Glycine max
Glyma.12G221000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38040559-38041558 Glycine max
Glyma.12G221000 2.0kb upstream 2.0kb upstream 4787 true Chr12: 38035772-38040558 Glycine max
Glyma.12G221000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38035772-38037771 Glycine max
Glyma.12G221000 2.0kb downstream 2.0kb downstream 4787 true Chr12: 38037772-38042558 Glycine max
Glyma.12G221000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38040559-38042558 Glycine max
Glyma.12G221000 5.0kb upstream 5.0kb upstream 7787 true Chr12: 38032772-38040558 Glycine max
Glyma.12G221000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38032772-38037771 Glycine max
Glyma.12G221000 5.0kb downstream 5.0kb downstream 7787 true Chr12: 38037772-38045558 Glycine max
Glyma.12G221000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38040559-38045558 Glycine max
Glyma.12G221000 10.0kb upstream 10.0kb upstream 12787 true Chr12: 38027772-38040558 Glycine max
Glyma.12G221000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38027772-38037771 Glycine max
Glyma.12G221000 10.0kb downstream 10.0kb downstream 12787 true Chr12: 38037772-38050558 Glycine max
Glyma.12G221000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38040559-38050558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308604 5265 Fabidae View MSA
124069878 5270 Rosid View MSA
123741697 5271 Pentapetalae View MSA
122796269 5272 Eudicot View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 157.622 0.0 527.79 High High
cufflinks 8.90119 0.0 24.6164    
cufflinks 6.78868 0.0 19.3629    
cufflinks 10.7519 0.0 29.3069    
cufflinks 2.95859 0.0 9.30492    
cufflinks 2.14551 0.0 7.09196    
cufflinks 2.98697 0.0 9.41457    
cufflinks 5.11082 0.0 15.027    
cufflinks 4.48765 0.0 13.3844    
cufflinks 4.067        
cufflinks 1.59        
cufflinks 5.847        
cufflinks 0.712       Low
cufflinks 0.55       Low
cufflinks 3.146        
cufflinks 18.278     High High
cufflinks 1.971        
cufflinks 4.479        
cufflinks 5.017        
cufflinks 16.423     High High
cufflinks 1.922        
cufflinks 21.093     High High
cufflinks 11.559     High  
cufflinks 1.642        
cufflinks 23.024     High High
cufflinks 1.716        

0 Strain