Gene : Glyma.12G222300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN Genomic Order:  2223
Name:  ? Glyma.12G222300 Secondary Identifier:  ? PAC:30549121
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G222300 0.5kb upstream 0.5kb upstream 3591 true Chr12: 38180854-38184444 Glycine max
Glyma.12G222300 0.5kb upstream 0.5kb upstream 500 false Chr12: 38183945-38184444 Glycine max
Glyma.12G222300 0.5kb downstream 0.5kb downstream 3591 true Chr12: 38180354-38183944 Glycine max
Glyma.12G222300 0.5kb downstream 0.5kb downstream 500 false Chr12: 38180354-38180853 Glycine max
Glyma.12G222300 1.0kb upstream 1.0kb upstream 4091 true Chr12: 38180854-38184944 Glycine max
Glyma.12G222300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38183945-38184944 Glycine max
Glyma.12G222300 1.0kb downstream 1.0kb downstream 4091 true Chr12: 38179854-38183944 Glycine max
Glyma.12G222300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38179854-38180853 Glycine max
Glyma.12G222300 2.0kb upstream 2.0kb upstream 5091 true Chr12: 38180854-38185944 Glycine max
Glyma.12G222300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38183945-38185944 Glycine max
Glyma.12G222300 2.0kb downstream 2.0kb downstream 5091 true Chr12: 38178854-38183944 Glycine max
Glyma.12G222300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38178854-38180853 Glycine max
Glyma.12G222300 5.0kb upstream 5.0kb upstream 8091 true Chr12: 38180854-38188944 Glycine max
Glyma.12G222300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38183945-38188944 Glycine max
Glyma.12G222300 5.0kb downstream 5.0kb downstream 8091 true Chr12: 38175854-38183944 Glycine max
Glyma.12G222300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38175854-38180853 Glycine max
Glyma.12G222300 10.0kb upstream 10.0kb upstream 13091 true Chr12: 38180854-38193944 Glycine max
Glyma.12G222300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38183945-38193944 Glycine max
Glyma.12G222300 10.0kb downstream 10.0kb downstream 13091 true Chr12: 38170854-38183944 Glycine max
Glyma.12G222300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38170854-38180853 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304685 5265 Fabidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87832 0.0 9.5485    
cufflinks 3.08729 0.0 10.4115    
cufflinks 1.72549 0.0 6.6839    
cufflinks 3.19447 0.0 13.5362    
cufflinks 1.6886 0.0 9.06152    
cufflinks 0.828465 0.0 3.6962   Low
cufflinks 21.8472 0.0 76.5265 High High
cufflinks 1.79693 0.0 6.99911    
cufflinks 1.78847 0.0 6.99057    
cufflinks 0.627        
cufflinks 0.464        
cufflinks 0.625        
cufflinks 0.367       Low
cufflinks 0.421       Low
cufflinks 0.636        
cufflinks 0.674        
cufflinks 0.477        
cufflinks 1.013       High
cufflinks 1.049       High
cufflinks 0.715        
cufflinks 0.563        
cufflinks 0.812        
cufflinks 1.273       High
cufflinks 0.404       Low
cufflinks 0.668        
cufflinks 0.67        

0 Strain