Gene : Glyma.12G222400 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  2224
Name:  ? Glyma.12G222400 Secondary Identifier:  ? PAC:30548715
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G222400 0.5kb upstream 0.5kb upstream 2648 true Chr12: 38186066-38188713 Glycine max
Glyma.12G222400 0.5kb upstream 0.5kb upstream 500 false Chr12: 38188214-38188713 Glycine max
Glyma.12G222400 0.5kb downstream 0.5kb downstream 2648 true Chr12: 38185566-38188213 Glycine max
Glyma.12G222400 0.5kb downstream 0.5kb downstream 500 false Chr12: 38185566-38186065 Glycine max
Glyma.12G222400 1.0kb upstream 1.0kb upstream 3148 true Chr12: 38186066-38189213 Glycine max
Glyma.12G222400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38188214-38189213 Glycine max
Glyma.12G222400 1.0kb downstream 1.0kb downstream 3148 true Chr12: 38185066-38188213 Glycine max
Glyma.12G222400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38185066-38186065 Glycine max
Glyma.12G222400 2.0kb upstream 2.0kb upstream 4148 true Chr12: 38186066-38190213 Glycine max
Glyma.12G222400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38188214-38190213 Glycine max
Glyma.12G222400 2.0kb downstream 2.0kb downstream 4148 true Chr12: 38184066-38188213 Glycine max
Glyma.12G222400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38184066-38186065 Glycine max
Glyma.12G222400 5.0kb upstream 5.0kb upstream 7148 true Chr12: 38186066-38193213 Glycine max
Glyma.12G222400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38188214-38193213 Glycine max
Glyma.12G222400 5.0kb downstream 5.0kb downstream 7148 true Chr12: 38181066-38188213 Glycine max
Glyma.12G222400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38181066-38186065 Glycine max
Glyma.12G222400 10.0kb upstream 10.0kb upstream 12148 true Chr12: 38186066-38198213 Glycine max
Glyma.12G222400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38188214-38198213 Glycine max
Glyma.12G222400 10.0kb downstream 10.0kb downstream 12148 true Chr12: 38176066-38188213 Glycine max
Glyma.12G222400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38176066-38186065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304605 5265 Fabidae View MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.179 0.0 278.953 High  
cufflinks 33.3966 0.0 112.175 High  
cufflinks 95.7232 0.0 396.348 High  
cufflinks 13.9836 0.0 49.2884   Low
cufflinks 86.419 0.0 345.744 High  
cufflinks 24.4341 0.0 82.7824 High  
cufflinks 24.6115 0.0 84.1345 High  
cufflinks 59.931 0.0 220.057 High  
cufflinks 145.29 0.0 590.608 High High
cufflinks 7.715     High  
cufflinks 662.228     High High
cufflinks 15.706     High  
cufflinks 3.259       Low
cufflinks 7.241     High  
cufflinks 763.383     High High
cufflinks 45.878     High  
cufflinks 18.585     High  
cufflinks 4.004       Low
cufflinks 9.26     High  
cufflinks 87.597     High  
cufflinks 647.449     High High
cufflinks 44.66     High  
cufflinks 7.012        
cufflinks 486.232     High High
cufflinks 48.075     High  
cufflinks 208.048     High  

0 Strain