Gene : Glyma.12G222500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2225
Name:  ? Glyma.12G222500 Secondary Identifier:  ? PAC:30549050
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G222500 0.5kb upstream 0.5kb upstream 3286 true Chr12: 38215302-38218587 Glycine max
Glyma.12G222500 0.5kb upstream 0.5kb upstream 500 false Chr12: 38215302-38215801 Glycine max
Glyma.12G222500 0.5kb downstream 0.5kb downstream 3286 true Chr12: 38215802-38219087 Glycine max
Glyma.12G222500 0.5kb downstream 0.5kb downstream 500 false Chr12: 38218588-38219087 Glycine max
Glyma.12G222500 1.0kb upstream 1.0kb upstream 3786 true Chr12: 38214802-38218587 Glycine max
Glyma.12G222500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38214802-38215801 Glycine max
Glyma.12G222500 1.0kb downstream 1.0kb downstream 3786 true Chr12: 38215802-38219587 Glycine max
Glyma.12G222500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38218588-38219587 Glycine max
Glyma.12G222500 2.0kb upstream 2.0kb upstream 4786 true Chr12: 38213802-38218587 Glycine max
Glyma.12G222500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38213802-38215801 Glycine max
Glyma.12G222500 2.0kb downstream 2.0kb downstream 4786 true Chr12: 38215802-38220587 Glycine max
Glyma.12G222500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38218588-38220587 Glycine max
Glyma.12G222500 5.0kb upstream 5.0kb upstream 7786 true Chr12: 38210802-38218587 Glycine max
Glyma.12G222500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38210802-38215801 Glycine max
Glyma.12G222500 5.0kb downstream 5.0kb downstream 7786 true Chr12: 38215802-38223587 Glycine max
Glyma.12G222500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38218588-38223587 Glycine max
Glyma.12G222500 10.0kb upstream 10.0kb upstream 12786 true Chr12: 38205802-38218587 Glycine max
Glyma.12G222500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38205802-38215801 Glycine max
Glyma.12G222500 10.0kb downstream 10.0kb downstream 12786 true Chr12: 38215802-38228587 Glycine max
Glyma.12G222500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38218588-38228587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304328 5265 Fabidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.30459 0.0 17.9575   Low
cufflinks 17.6632 0.0 47.1537    
cufflinks 24.0336 0.0 64.2379 High  
cufflinks 26.0569 0.0 69.7784 High  
cufflinks 25.2339 0.0 67.5664 High  
cufflinks 7.37446 0.0 20.6513   Low
cufflinks 5.78178 0.0 16.5981   Low
cufflinks 12.6292 0.0 34.0019    
cufflinks 22.6668 0.0 60.5493 High  
cufflinks 29.412     High High
cufflinks 12.845     High  
cufflinks 15.401     High  
cufflinks 18.261     High  
cufflinks 12.183     High  
cufflinks 10.182     High  
cufflinks 6.722        
cufflinks 41.909     High High
cufflinks 11.989     High  
cufflinks 10.447     High  
cufflinks 4.449       Low
cufflinks 14.565     High  
cufflinks 4.762       Low
cufflinks 8.473     High  
cufflinks 12.196     High  
cufflinks 5.11       Low
cufflinks 30.092     High High

0 Strain