Gene : Glyma.12G225200 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  2252
Name:  ? Glyma.12G225200 Secondary Identifier:  ? PAC:30545510
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G225200 0.5kb upstream 0.5kb upstream 3311 true Chr12: 38479459-38482769 Glycine max
Glyma.12G225200 0.5kb upstream 0.5kb upstream 500 false Chr12: 38479459-38479958 Glycine max
Glyma.12G225200 0.5kb downstream 0.5kb downstream 3311 true Chr12: 38479959-38483269 Glycine max
Glyma.12G225200 0.5kb downstream 0.5kb downstream 500 false Chr12: 38482770-38483269 Glycine max
Glyma.12G225200 1.0kb upstream 1.0kb upstream 3811 true Chr12: 38478959-38482769 Glycine max
Glyma.12G225200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38478959-38479958 Glycine max
Glyma.12G225200 1.0kb downstream 1.0kb downstream 3811 true Chr12: 38479959-38483769 Glycine max
Glyma.12G225200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38482770-38483769 Glycine max
Glyma.12G225200 2.0kb upstream 2.0kb upstream 4811 true Chr12: 38477959-38482769 Glycine max
Glyma.12G225200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38477959-38479958 Glycine max
Glyma.12G225200 2.0kb downstream 2.0kb downstream 4811 true Chr12: 38479959-38484769 Glycine max
Glyma.12G225200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38482770-38484769 Glycine max
Glyma.12G225200 5.0kb upstream 5.0kb upstream 7811 true Chr12: 38474959-38482769 Glycine max
Glyma.12G225200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38474959-38479958 Glycine max
Glyma.12G225200 5.0kb downstream 5.0kb downstream 7811 true Chr12: 38479959-38487769 Glycine max
Glyma.12G225200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38482770-38487769 Glycine max
Glyma.12G225200 10.0kb upstream 10.0kb upstream 12811 true Chr12: 38469959-38482769 Glycine max
Glyma.12G225200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38469959-38479958 Glycine max
Glyma.12G225200 10.0kb downstream 10.0kb downstream 12811 true Chr12: 38479959-38492769 Glycine max
Glyma.12G225200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38482770-38492769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.05102 0.0 21.7608    
cufflinks 5.93586 0.0 16.3379   Low
cufflinks 16.6008 0.0 44.4302   High
cufflinks 10.4136 0.0 27.8452    
cufflinks 7.50859 0.0 20.3716    
cufflinks 8.27998 0.0 22.3336    
cufflinks 5.65763 0.0 15.6554   Low
cufflinks 16.5263 0.0 44.2474   High
cufflinks 9.48202 0.0 25.4284    
cufflinks 4.386        
cufflinks 5.1        
cufflinks 7.997     High  
cufflinks 2.546       Low
cufflinks 1.225       Low
cufflinks 4.046        
cufflinks 5.189        
cufflinks 6.568     High  
cufflinks 4.849        
cufflinks 6.604        
cufflinks 5.037        
cufflinks 3.249        
cufflinks 5.722        
cufflinks 6.809        
cufflinks 12.995     High High
cufflinks 4.602        
cufflinks 6.463     High  

0 Strain