Gene : Glyma.12G226600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2266
Name:  ? Glyma.12G226600 Secondary Identifier:  ? PAC:30546682
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G226600 0.5kb upstream 0.5kb upstream 1849 true Chr12: 38649506-38651354 Glycine max
Glyma.12G226600 0.5kb upstream 0.5kb upstream 500 false Chr12: 38649506-38650005 Glycine max
Glyma.12G226600 0.5kb downstream 0.5kb downstream 1849 true Chr12: 38650006-38651854 Glycine max
Glyma.12G226600 0.5kb downstream 0.5kb downstream 500 false Chr12: 38651355-38651854 Glycine max
Glyma.12G226600 1.0kb upstream 1.0kb upstream 2349 true Chr12: 38649006-38651354 Glycine max
Glyma.12G226600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38649006-38650005 Glycine max
Glyma.12G226600 1.0kb downstream 1.0kb downstream 2349 true Chr12: 38650006-38652354 Glycine max
Glyma.12G226600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38651355-38652354 Glycine max
Glyma.12G226600 2.0kb upstream 2.0kb upstream 3349 true Chr12: 38648006-38651354 Glycine max
Glyma.12G226600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38648006-38650005 Glycine max
Glyma.12G226600 2.0kb downstream 2.0kb downstream 3349 true Chr12: 38650006-38653354 Glycine max
Glyma.12G226600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38651355-38653354 Glycine max
Glyma.12G226600 5.0kb upstream 5.0kb upstream 6349 true Chr12: 38645006-38651354 Glycine max
Glyma.12G226600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38645006-38650005 Glycine max
Glyma.12G226600 5.0kb downstream 5.0kb downstream 6349 true Chr12: 38650006-38656354 Glycine max
Glyma.12G226600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38651355-38656354 Glycine max
Glyma.12G226600 10.0kb upstream 10.0kb upstream 11349 true Chr12: 38640006-38651354 Glycine max
Glyma.12G226600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38640006-38650005 Glycine max
Glyma.12G226600 10.0kb downstream 10.0kb downstream 11349 true Chr12: 38650006-38661354 Glycine max
Glyma.12G226600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38651355-38661354 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300094 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6952 0.0 55.4001   High
cufflinks 8.82214 0.0 25.2011   Low
cufflinks 11.7714 0.0 32.8933    
cufflinks 12.5587 0.0 34.6402    
cufflinks 14.1271 0.0 38.3282    
cufflinks 11.179 0.0 30.9266    
cufflinks 7.96086 0.0 22.8375   Low
cufflinks 12.6451 0.0 34.815    
cufflinks 13.3024 0.0 36.3798    
cufflinks 13.891     High  
cufflinks 19.532     High  
cufflinks 12.048     High  
cufflinks 9.733     High  
cufflinks 1.018       Low
cufflinks 33.36     High High
cufflinks 15.664     High  
cufflinks 62.957     High High
cufflinks 15.422     High  
cufflinks 6.634        
cufflinks 5.451        
cufflinks 9.795     High  
cufflinks 5.99        
cufflinks 6.741        
cufflinks 14.938     High  
cufflinks 3.204       Low
cufflinks 29.92     High High

0 Strain