Gene : Glyma.12G226900 G. max Wm82.a2.v1
Genomic Order:  2269 Name:  ? Glyma.12G226900
Secondary Identifier:  ? PAC:30545788
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G226900 0.5kb upstream 0.5kb upstream 3305 true Chr12: 38677622-38680926 Glycine max
Glyma.12G226900 0.5kb upstream 0.5kb upstream 500 false Chr12: 38677622-38678121 Glycine max
Glyma.12G226900 0.5kb downstream 0.5kb downstream 3305 true Chr12: 38678122-38681426 Glycine max
Glyma.12G226900 0.5kb downstream 0.5kb downstream 500 false Chr12: 38680927-38681426 Glycine max
Glyma.12G226900 1.0kb upstream 1.0kb upstream 3805 true Chr12: 38677122-38680926 Glycine max
Glyma.12G226900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38677122-38678121 Glycine max
Glyma.12G226900 1.0kb downstream 1.0kb downstream 3805 true Chr12: 38678122-38681926 Glycine max
Glyma.12G226900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38680927-38681926 Glycine max
Glyma.12G226900 2.0kb upstream 2.0kb upstream 4805 true Chr12: 38676122-38680926 Glycine max
Glyma.12G226900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38676122-38678121 Glycine max
Glyma.12G226900 2.0kb downstream 2.0kb downstream 4805 true Chr12: 38678122-38682926 Glycine max
Glyma.12G226900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38680927-38682926 Glycine max
Glyma.12G226900 5.0kb upstream 5.0kb upstream 7805 true Chr12: 38673122-38680926 Glycine max
Glyma.12G226900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38673122-38678121 Glycine max
Glyma.12G226900 5.0kb downstream 5.0kb downstream 7805 true Chr12: 38678122-38685926 Glycine max
Glyma.12G226900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38680927-38685926 Glycine max
Glyma.12G226900 10.0kb upstream 10.0kb upstream 12805 true Chr12: 38668122-38680926 Glycine max
Glyma.12G226900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38668122-38678121 Glycine max
Glyma.12G226900 10.0kb downstream 10.0kb downstream 12805 true Chr12: 38678122-38690926 Glycine max
Glyma.12G226900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38680927-38690926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304227 5265 Fabidae View MSA
124065299 5270 Rosid View MSA
123737412 5271 Pentapetalae View MSA
122788716 5272 Eudicot View MSA
122046117 5273 Angiosperm View MSA
121310558 5274 Embryophyte View MSA
123348011 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3552 0.0 30.2971    
cufflinks 13.7274 0.0 36.6696   High
cufflinks 10.8954 0.0 29.0695    
cufflinks 9.47016 0.0 25.3179    
cufflinks 8.24737 0.0 22.1645   Low
cufflinks 9.34227 0.0 25.0027    
cufflinks 7.58001 0.0 20.4552   Low
cufflinks 12.1571 0.0 32.4366    
cufflinks 11.7525 0.0 31.3542    
cufflinks 13.867     High  
cufflinks 10.247     High  
cufflinks 17.03     High  
cufflinks 14.433     High  
cufflinks 15.191     High  
cufflinks 13.548     High  
cufflinks 21.74     High High
cufflinks 5.927       Low
cufflinks 21.292     High  
cufflinks 18.764     High  
cufflinks 20.787     High  
cufflinks 9.791     High Low
cufflinks 21.335     High  
cufflinks 21.281     High  
cufflinks 10.774     High  
cufflinks 20.659     High  
cufflinks 9.56     High Low

0 Strain