Gene : Glyma.12G215900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12903:SF1 - 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC Genomic Order:  2159
Name:  ? Glyma.12G215900 Secondary Identifier:  ? PAC:30546367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G215900 0.5kb upstream 0.5kb upstream 3709 true Chr12: 37501801-37505509 Glycine max
Glyma.12G215900 0.5kb upstream 0.5kb upstream 500 false Chr12: 37505010-37505509 Glycine max
Glyma.12G215900 0.5kb downstream 0.5kb downstream 3709 true Chr12: 37501301-37505009 Glycine max
Glyma.12G215900 0.5kb downstream 0.5kb downstream 500 false Chr12: 37501301-37501800 Glycine max
Glyma.12G215900 1.0kb upstream 1.0kb upstream 4209 true Chr12: 37501801-37506009 Glycine max
Glyma.12G215900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37505010-37506009 Glycine max
Glyma.12G215900 1.0kb downstream 1.0kb downstream 4209 true Chr12: 37500801-37505009 Glycine max
Glyma.12G215900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37500801-37501800 Glycine max
Glyma.12G215900 2.0kb upstream 2.0kb upstream 5209 true Chr12: 37501801-37507009 Glycine max
Glyma.12G215900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37505010-37507009 Glycine max
Glyma.12G215900 2.0kb downstream 2.0kb downstream 5209 true Chr12: 37499801-37505009 Glycine max
Glyma.12G215900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37499801-37501800 Glycine max
Glyma.12G215900 5.0kb upstream 5.0kb upstream 8209 true Chr12: 37501801-37510009 Glycine max
Glyma.12G215900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37505010-37510009 Glycine max
Glyma.12G215900 5.0kb downstream 5.0kb downstream 8209 true Chr12: 37496801-37505009 Glycine max
Glyma.12G215900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37496801-37501800 Glycine max
Glyma.12G215900 10.0kb upstream 10.0kb upstream 13209 true Chr12: 37501801-37515009 Glycine max
Glyma.12G215900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37505010-37515009 Glycine max
Glyma.12G215900 10.0kb downstream 10.0kb downstream 13209 true Chr12: 37491801-37505009 Glycine max
Glyma.12G215900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37491801-37501800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299641 5265 Fabidae View MSA
124064629 5270 Rosid View MSA
123738046 5271 Pentapetalae View MSA
122791354 5272 Eudicot View MSA
122043380 5273 Angiosperm View MSA
121346422 5274 Embryophyte View MSA
123426364 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.8834 0.0 174.084 High High
cufflinks 38.5483 0.0 114.262 High High
cufflinks 7.39136 0.0 40.6953   Low
cufflinks 11.1909 0.0 38.5308    
cufflinks 7.76816 0.0 45.5013    
cufflinks 11.7112 0.0 61.368    
cufflinks 26.7761 0.0 80.8819 High  
cufflinks 10.7829 0.0 37.5286    
cufflinks 9.17477 0.0 33.7173    
cufflinks 2.525        
cufflinks 2.098        
cufflinks 1.787        
cufflinks 0.826        
cufflinks 0.906        
cufflinks 0.738       Low
cufflinks 18.384     High High
cufflinks 0.557       Low
cufflinks 2.36        
cufflinks 3.745        
cufflinks 20.299     High High
cufflinks 1.996        
cufflinks 17.51     High High
cufflinks 17.513     High High
cufflinks 1.889        
cufflinks 20.631     High High
cufflinks 0.662       Low

0 Strain