Gene : Glyma.12G216100 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  2161
Name:  ? Glyma.12G216100 Secondary Identifier:  ? PAC:30546966
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G216100 0.5kb upstream 0.5kb upstream 4082 true Chr12: 37527408-37531489 Glycine max
Glyma.12G216100 0.5kb upstream 0.5kb upstream 500 false Chr12: 37527408-37527907 Glycine max
Glyma.12G216100 0.5kb downstream 0.5kb downstream 4082 true Chr12: 37527908-37531989 Glycine max
Glyma.12G216100 0.5kb downstream 0.5kb downstream 500 false Chr12: 37531490-37531989 Glycine max
Glyma.12G216100 1.0kb upstream 1.0kb upstream 4582 true Chr12: 37526908-37531489 Glycine max
Glyma.12G216100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37526908-37527907 Glycine max
Glyma.12G216100 1.0kb downstream 1.0kb downstream 4582 true Chr12: 37527908-37532489 Glycine max
Glyma.12G216100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37531490-37532489 Glycine max
Glyma.12G216100 2.0kb upstream 2.0kb upstream 5582 true Chr12: 37525908-37531489 Glycine max
Glyma.12G216100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37525908-37527907 Glycine max
Glyma.12G216100 2.0kb downstream 2.0kb downstream 5582 true Chr12: 37527908-37533489 Glycine max
Glyma.12G216100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37531490-37533489 Glycine max
Glyma.12G216100 5.0kb upstream 5.0kb upstream 8582 true Chr12: 37522908-37531489 Glycine max
Glyma.12G216100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37522908-37527907 Glycine max
Glyma.12G216100 5.0kb downstream 5.0kb downstream 8582 true Chr12: 37527908-37536489 Glycine max
Glyma.12G216100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37531490-37536489 Glycine max
Glyma.12G216100 10.0kb upstream 10.0kb upstream 13582 true Chr12: 37517908-37531489 Glycine max
Glyma.12G216100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37517908-37527907 Glycine max
Glyma.12G216100 10.0kb downstream 10.0kb downstream 13582 true Chr12: 37527908-37541489 Glycine max
Glyma.12G216100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37531490-37541489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240001 5265 Fabidae Singleton cluster - no MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.53671 0.0 16.0966    
cufflinks 2.04672 0.0 10.0284    
cufflinks 3.61249 0.0 17.6303    
cufflinks 1.82985 0.0 6.09353    
cufflinks 1.868 0.0 6.16866    
cufflinks 4.24945 0.0 18.5822   High
cufflinks 3.65751 0.0 16.5037    
cufflinks 1.34607 0.0 4.79851   Low
cufflinks 1.49076 0.0 5.33135   Low
cufflinks 7.907     High  
cufflinks 38.762     High  
cufflinks 5.114        
cufflinks 3.203        
cufflinks 1.124       Low
cufflinks 34.094     High  
cufflinks 5.146        
cufflinks 182.944     High High
cufflinks 5.842        
cufflinks 2.016       Low
cufflinks 3.848        
cufflinks 25.328     High  
cufflinks 4.57        
cufflinks 6.53        
cufflinks 27.644     High  
cufflinks 4.067        
cufflinks 86.427     High High

0 Strain