Gene : Glyma.12G219100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10139 - DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A Genomic Order:  2191
Name:  ? Glyma.12G219100 Secondary Identifier:  ? PAC:30547349
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G219100 0.5kb upstream 0.5kb upstream 11683 true Chr12: 37870662-37882344 Glycine max
Glyma.12G219100 0.5kb upstream 0.5kb upstream 500 false Chr12: 37870662-37871161 Glycine max
Glyma.12G219100 0.5kb downstream 0.5kb downstream 11683 true Chr12: 37871162-37882844 Glycine max
Glyma.12G219100 0.5kb downstream 0.5kb downstream 500 false Chr12: 37882345-37882844 Glycine max
Glyma.12G219100 1.0kb upstream 1.0kb upstream 12183 true Chr12: 37870162-37882344 Glycine max
Glyma.12G219100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37870162-37871161 Glycine max
Glyma.12G219100 1.0kb downstream 1.0kb downstream 12183 true Chr12: 37871162-37883344 Glycine max
Glyma.12G219100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37882345-37883344 Glycine max
Glyma.12G219100 2.0kb upstream 2.0kb upstream 13183 true Chr12: 37869162-37882344 Glycine max
Glyma.12G219100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37869162-37871161 Glycine max
Glyma.12G219100 2.0kb downstream 2.0kb downstream 13183 true Chr12: 37871162-37884344 Glycine max
Glyma.12G219100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37882345-37884344 Glycine max
Glyma.12G219100 5.0kb upstream 5.0kb upstream 16183 true Chr12: 37866162-37882344 Glycine max
Glyma.12G219100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37866162-37871161 Glycine max
Glyma.12G219100 5.0kb downstream 5.0kb downstream 16183 true Chr12: 37871162-37887344 Glycine max
Glyma.12G219100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37882345-37887344 Glycine max
Glyma.12G219100 10.0kb upstream 10.0kb upstream 21183 true Chr12: 37861162-37882344 Glycine max
Glyma.12G219100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37861162-37871161 Glycine max
Glyma.12G219100 10.0kb downstream 10.0kb downstream 21183 true Chr12: 37871162-37892344 Glycine max
Glyma.12G219100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37882345-37892344 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304450 5265 Fabidae View MSA
124066590 5270 Rosid View MSA
123740797 5271 Pentapetalae View MSA
122791229 5272 Eudicot View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51551 0.0 14.2713    
cufflinks 6.20184 0.0 18.8387   High
cufflinks 3.61932 0.0 11.8842    
cufflinks 4.06709 0.0 13.0264    
cufflinks 4.96274 0.0 15.4755    
cufflinks 2.97703 0.0 10.2873   Low
cufflinks 6.82613 0.0 20.4984   High
cufflinks 2.98829 0.0 10.313   Low
cufflinks 4.94461 0.0 15.4123    
cufflinks 0.825        
cufflinks 0.369       Low
cufflinks 1.206        
cufflinks 1.441        
cufflinks 1.875       High
cufflinks 0.781        
cufflinks 1.172        
cufflinks 0.785        
cufflinks 1.074        
cufflinks 1.991       High
cufflinks 1.153        
cufflinks 0.605       Low
cufflinks 1.119        
cufflinks 1.441        
cufflinks 0.605       Low
cufflinks 1.113        
cufflinks 1.069        

0 Strain