Gene : Glyma.12G205200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2052
Name:  ? Glyma.12G205200 Secondary Identifier:  ? PAC:30547321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G205200 0.5kb upstream 0.5kb upstream 1768 true Chr12: 36551913-36553680 Glycine max
Glyma.12G205200 0.5kb upstream 0.5kb upstream 500 false Chr12: 36551913-36552412 Glycine max
Glyma.12G205200 0.5kb downstream 0.5kb downstream 1768 true Chr12: 36552413-36554180 Glycine max
Glyma.12G205200 0.5kb downstream 0.5kb downstream 500 false Chr12: 36553681-36554180 Glycine max
Glyma.12G205200 1.0kb upstream 1.0kb upstream 2268 true Chr12: 36551413-36553680 Glycine max
Glyma.12G205200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36551413-36552412 Glycine max
Glyma.12G205200 1.0kb downstream 1.0kb downstream 2268 true Chr12: 36552413-36554680 Glycine max
Glyma.12G205200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36553681-36554680 Glycine max
Glyma.12G205200 2.0kb upstream 2.0kb upstream 3268 true Chr12: 36550413-36553680 Glycine max
Glyma.12G205200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36550413-36552412 Glycine max
Glyma.12G205200 2.0kb downstream 2.0kb downstream 3268 true Chr12: 36552413-36555680 Glycine max
Glyma.12G205200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36553681-36555680 Glycine max
Glyma.12G205200 5.0kb upstream 5.0kb upstream 6268 true Chr12: 36547413-36553680 Glycine max
Glyma.12G205200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36547413-36552412 Glycine max
Glyma.12G205200 5.0kb downstream 5.0kb downstream 6268 true Chr12: 36552413-36558680 Glycine max
Glyma.12G205200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36553681-36558680 Glycine max
Glyma.12G205200 10.0kb upstream 10.0kb upstream 11268 true Chr12: 36542413-36553680 Glycine max
Glyma.12G205200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36542413-36552412 Glycine max
Glyma.12G205200 10.0kb downstream 10.0kb downstream 11268 true Chr12: 36552413-36563680 Glycine max
Glyma.12G205200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36553681-36563680 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122255198 5265 Fabidae View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178384 0.0 0.710046 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0782381 0.0 0.322773 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.151       High
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low

0 Strain