Gene : Glyma.12G208400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2084
Name:  ? Glyma.12G208400 Secondary Identifier:  ? PAC:30548742
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G208400 0.5kb upstream 0.5kb upstream 5037 true Chr12: 36772416-36777452 Glycine max
Glyma.12G208400 0.5kb upstream 0.5kb upstream 500 false Chr12: 36772416-36772915 Glycine max
Glyma.12G208400 0.5kb downstream 0.5kb downstream 5037 true Chr12: 36772916-36777952 Glycine max
Glyma.12G208400 0.5kb downstream 0.5kb downstream 500 false Chr12: 36777453-36777952 Glycine max
Glyma.12G208400 1.0kb upstream 1.0kb upstream 5537 true Chr12: 36771916-36777452 Glycine max
Glyma.12G208400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36771916-36772915 Glycine max
Glyma.12G208400 1.0kb downstream 1.0kb downstream 5537 true Chr12: 36772916-36778452 Glycine max
Glyma.12G208400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36777453-36778452 Glycine max
Glyma.12G208400 2.0kb upstream 2.0kb upstream 6537 true Chr12: 36770916-36777452 Glycine max
Glyma.12G208400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36770916-36772915 Glycine max
Glyma.12G208400 2.0kb downstream 2.0kb downstream 6537 true Chr12: 36772916-36779452 Glycine max
Glyma.12G208400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36777453-36779452 Glycine max
Glyma.12G208400 5.0kb upstream 5.0kb upstream 9537 true Chr12: 36767916-36777452 Glycine max
Glyma.12G208400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36767916-36772915 Glycine max
Glyma.12G208400 5.0kb downstream 5.0kb downstream 9537 true Chr12: 36772916-36782452 Glycine max
Glyma.12G208400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36777453-36782452 Glycine max
Glyma.12G208400 10.0kb upstream 10.0kb upstream 14537 true Chr12: 36762916-36777452 Glycine max
Glyma.12G208400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36762916-36772915 Glycine max
Glyma.12G208400 10.0kb downstream 10.0kb downstream 14537 true Chr12: 36772916-36787452 Glycine max
Glyma.12G208400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36777453-36787452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0197617 0.0 0.0842145 Low Low
cufflinks 3.21044 0.0 9.5765    
cufflinks 7.6772 0.0 20.8591    
cufflinks 1.39266 0.0 4.65186    
cufflinks 6.79373 0.0 18.6686    
cufflinks 4.27185 0.0 12.2823    
cufflinks 0.103173 0.0 0.404743 Low Low
cufflinks 1.64964 0.0 5.39951    
cufflinks 3.02346 0.0 9.10087    
cufflinks 7.317       High
cufflinks 1.087        
cufflinks 2.394        
cufflinks 4.88        
cufflinks 7.178     High High
cufflinks 0.071       Low
cufflinks 1.697        
cufflinks 0.243       Low
cufflinks 9.164     High High
cufflinks 0.681        
cufflinks 2.43        
cufflinks 0.822        
cufflinks 2.274        
cufflinks 1.783        
cufflinks 0.194       Low
cufflinks 1.293        
cufflinks 1.481        

0 Strain