Gene : Glyma.12G209600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Genomic Order:  2096
Name:  ? Glyma.12G209600 Secondary Identifier:  ? PAC:30547933
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G209600 0.5kb upstream 0.5kb upstream 5444 true Chr12: 36873917-36879360 Glycine max
Glyma.12G209600 0.5kb upstream 0.5kb upstream 500 false Chr12: 36878861-36879360 Glycine max
Glyma.12G209600 0.5kb downstream 0.5kb downstream 5444 true Chr12: 36873417-36878860 Glycine max
Glyma.12G209600 0.5kb downstream 0.5kb downstream 500 false Chr12: 36873417-36873916 Glycine max
Glyma.12G209600 1.0kb upstream 1.0kb upstream 5944 true Chr12: 36873917-36879860 Glycine max
Glyma.12G209600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36878861-36879860 Glycine max
Glyma.12G209600 1.0kb downstream 1.0kb downstream 5944 true Chr12: 36872917-36878860 Glycine max
Glyma.12G209600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36872917-36873916 Glycine max
Glyma.12G209600 2.0kb upstream 2.0kb upstream 6944 true Chr12: 36873917-36880860 Glycine max
Glyma.12G209600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36878861-36880860 Glycine max
Glyma.12G209600 2.0kb downstream 2.0kb downstream 6944 true Chr12: 36871917-36878860 Glycine max
Glyma.12G209600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36871917-36873916 Glycine max
Glyma.12G209600 5.0kb upstream 5.0kb upstream 9944 true Chr12: 36873917-36883860 Glycine max
Glyma.12G209600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36878861-36883860 Glycine max
Glyma.12G209600 5.0kb downstream 5.0kb downstream 9944 true Chr12: 36868917-36878860 Glycine max
Glyma.12G209600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36868917-36873916 Glycine max
Glyma.12G209600 10.0kb upstream 10.0kb upstream 14944 true Chr12: 36873917-36888860 Glycine max
Glyma.12G209600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36878861-36888860 Glycine max
Glyma.12G209600 10.0kb downstream 10.0kb downstream 14944 true Chr12: 36863917-36878860 Glycine max
Glyma.12G209600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36863917-36873916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299240 5265 Fabidae View MSA
124062840 5270 Rosid View MSA
123739280 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1817 0.0 32.981    
cufflinks 4.61565 0.0 13.7738   Low
cufflinks 8.71991 0.0 24.1003    
cufflinks 11.7818 0.0 31.9333    
cufflinks 16.4806 0.0 44.0998    
cufflinks 9.58325 0.0 26.3566    
cufflinks 2.28527 0.0 7.52507   Low
cufflinks 17.1379 0.0 45.7865    
cufflinks 12.396 0.0 33.5129    
cufflinks 2.503        
cufflinks 118.944     High High
cufflinks 3.947        
cufflinks 8.355     High  
cufflinks 8.052     High  
cufflinks 68.778     High High
cufflinks 2.142        
cufflinks 4.74        
cufflinks 14.898     High  
cufflinks 2.23        
cufflinks 2.425        
cufflinks 144.679     High High
cufflinks 2.641        
cufflinks 1.199       Low
cufflinks 42.323     High  
cufflinks 2.513        
cufflinks 50.089     High High

0 Strain