Gene : Glyma.13G003800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10024:SF182 - C2 CALCIUM/LIPID-BINDING AND PHOSPHORIBOSYLTRANSFERASE C-TERMINAL DOMAIN-CONTAINING PROTEIN Genomic Order:  38
Name:  ? Glyma.13G003800 Secondary Identifier:  ? PAC:30504225
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G003800 0.5kb upstream 0.5kb upstream 4096 true Chr13: 1066482-1070577 Glycine max
Glyma.13G003800 0.5kb upstream 0.5kb upstream 500 false Chr13: 1070078-1070577 Glycine max
Glyma.13G003800 0.5kb downstream 0.5kb downstream 4096 true Chr13: 1065982-1070077 Glycine max
Glyma.13G003800 0.5kb downstream 0.5kb downstream 500 false Chr13: 1065982-1066481 Glycine max
Glyma.13G003800 1.0kb upstream 1.0kb upstream 4596 true Chr13: 1066482-1071077 Glycine max
Glyma.13G003800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1070078-1071077 Glycine max
Glyma.13G003800 1.0kb downstream 1.0kb downstream 4596 true Chr13: 1065482-1070077 Glycine max
Glyma.13G003800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1065482-1066481 Glycine max
Glyma.13G003800 2.0kb upstream 2.0kb upstream 5596 true Chr13: 1066482-1072077 Glycine max
Glyma.13G003800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1070078-1072077 Glycine max
Glyma.13G003800 2.0kb downstream 2.0kb downstream 5596 true Chr13: 1064482-1070077 Glycine max
Glyma.13G003800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1064482-1066481 Glycine max
Glyma.13G003800 5.0kb upstream 5.0kb upstream 8596 true Chr13: 1066482-1075077 Glycine max
Glyma.13G003800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1070078-1075077 Glycine max
Glyma.13G003800 5.0kb downstream 5.0kb downstream 8596 true Chr13: 1061482-1070077 Glycine max
Glyma.13G003800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1061482-1066481 Glycine max
Glyma.13G003800 10.0kb upstream 10.0kb upstream 13596 true Chr13: 1066482-1080077 Glycine max
Glyma.13G003800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1070078-1080077 Glycine max
Glyma.13G003800 10.0kb downstream 10.0kb downstream 13596 true Chr13: 1056482-1070077 Glycine max
Glyma.13G003800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1056482-1066481 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304602 5265 Fabidae View MSA
124062380 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.501118 0.0 1.75615    
cufflinks 0.772918 0.0 2.60736    
cufflinks 0.290809 0.0 1.06495   Low
cufflinks 1.38792 0.0 4.3122    
cufflinks 1.80249 0.0 5.34059    
cufflinks 0.19532 0.0 0.726919 Low Low
cufflinks 1.20322 0.0 3.78812    
cufflinks 2.35144 0.0 6.80502   High
cufflinks 1.43921 0.0 4.43852    
cufflinks 1.27        
cufflinks 0.72        
cufflinks 0.672        
cufflinks 1.711       High
cufflinks 1.878       High
cufflinks 0.125       Low
cufflinks 1.315        
cufflinks 2.229       High
cufflinks 1.211        
cufflinks 0.727        
cufflinks 0.918        
cufflinks 0.498        
cufflinks 0.927        
cufflinks 0.71        
cufflinks 0.546        
cufflinks 0.848        
cufflinks 0.812        

0 Strain