Gene : Glyma.13G004900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2804 - Phosphorylcholine transferase/cholinephosphate cytidylyltransferase Genomic Order:  49
Name:  ? Glyma.13G004900 Secondary Identifier:  ? PAC:30504033
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY3O-450 Glycine max pathologic  
Gmax PWY4FS-2 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G004900 0.5kb upstream 0.5kb upstream 4988 true Chr13: 1361051-1366038 Glycine max
Glyma.13G004900 0.5kb upstream 0.5kb upstream 500 false Chr13: 1361051-1361550 Glycine max
Glyma.13G004900 0.5kb downstream 0.5kb downstream 4988 true Chr13: 1361551-1366538 Glycine max
Glyma.13G004900 0.5kb downstream 0.5kb downstream 500 false Chr13: 1366039-1366538 Glycine max
Glyma.13G004900 1.0kb upstream 1.0kb upstream 5488 true Chr13: 1360551-1366038 Glycine max
Glyma.13G004900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1360551-1361550 Glycine max
Glyma.13G004900 1.0kb downstream 1.0kb downstream 5488 true Chr13: 1361551-1367038 Glycine max
Glyma.13G004900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1366039-1367038 Glycine max
Glyma.13G004900 2.0kb upstream 2.0kb upstream 6488 true Chr13: 1359551-1366038 Glycine max
Glyma.13G004900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1359551-1361550 Glycine max
Glyma.13G004900 2.0kb downstream 2.0kb downstream 6488 true Chr13: 1361551-1368038 Glycine max
Glyma.13G004900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1366039-1368038 Glycine max
Glyma.13G004900 5.0kb upstream 5.0kb upstream 9488 true Chr13: 1356551-1366038 Glycine max
Glyma.13G004900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1356551-1361550 Glycine max
Glyma.13G004900 5.0kb downstream 5.0kb downstream 9488 true Chr13: 1361551-1371038 Glycine max
Glyma.13G004900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1366039-1371038 Glycine max
Glyma.13G004900 10.0kb upstream 10.0kb upstream 14488 true Chr13: 1351551-1366038 Glycine max
Glyma.13G004900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1351551-1361550 Glycine max
Glyma.13G004900 10.0kb downstream 10.0kb downstream 14488 true Chr13: 1361551-1376038 Glycine max
Glyma.13G004900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1366039-1376038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255318 5265 Fabidae View MSA
123997092 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.216763 0.0 0.853448    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.637        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain