Gene : Glyma.13G005100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33179:SF7 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MKA23 Genomic Order:  51
Name:  ? Glyma.13G005100 Secondary Identifier:  ? PAC:30502628
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G005100 0.5kb upstream 0.5kb upstream 2104 true Chr13: 1422443-1424546 Glycine max
Glyma.13G005100 0.5kb upstream 0.5kb upstream 500 false Chr13: 1424047-1424546 Glycine max
Glyma.13G005100 0.5kb downstream 0.5kb downstream 2104 true Chr13: 1421943-1424046 Glycine max
Glyma.13G005100 0.5kb downstream 0.5kb downstream 500 false Chr13: 1421943-1422442 Glycine max
Glyma.13G005100 1.0kb upstream 1.0kb upstream 2604 true Chr13: 1422443-1425046 Glycine max
Glyma.13G005100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1424047-1425046 Glycine max
Glyma.13G005100 1.0kb downstream 1.0kb downstream 2604 true Chr13: 1421443-1424046 Glycine max
Glyma.13G005100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1421443-1422442 Glycine max
Glyma.13G005100 2.0kb upstream 2.0kb upstream 3604 true Chr13: 1422443-1426046 Glycine max
Glyma.13G005100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1424047-1426046 Glycine max
Glyma.13G005100 2.0kb downstream 2.0kb downstream 3604 true Chr13: 1420443-1424046 Glycine max
Glyma.13G005100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1420443-1422442 Glycine max
Glyma.13G005100 5.0kb upstream 5.0kb upstream 6604 true Chr13: 1422443-1429046 Glycine max
Glyma.13G005100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1424047-1429046 Glycine max
Glyma.13G005100 5.0kb downstream 5.0kb downstream 6604 true Chr13: 1417443-1424046 Glycine max
Glyma.13G005100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1417443-1422442 Glycine max
Glyma.13G005100 10.0kb upstream 10.0kb upstream 11604 true Chr13: 1422443-1434046 Glycine max
Glyma.13G005100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1424047-1434046 Glycine max
Glyma.13G005100 10.0kb downstream 10.0kb downstream 11604 true Chr13: 1412443-1424046 Glycine max
Glyma.13G005100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1412443-1422442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314098 5265 Fabidae View MSA
124071410 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2011 0.0 41.0102   High
cufflinks 0.875958 0.0 3.19189    
cufflinks 6.11032 0.0 17.9932    
cufflinks 2.17872 0.0 7.35144    
cufflinks 3.96671 0.0 12.3207    
cufflinks 19.0914 0.0 51.0659   High
cufflinks 0.271212 0.0 1.04416   Low
cufflinks 1.3181 0.0 4.66132    
cufflinks 3.37004 0.0 10.7202    
cufflinks 6.768        
cufflinks 24.635     High High
cufflinks 4.686        
cufflinks 3.71        
cufflinks 1.561        
cufflinks 6.581     High  
cufflinks 0.926        
cufflinks 26.646     High High
cufflinks 1.401        
cufflinks 1.539        
cufflinks 0.449       Low
cufflinks 24.715     High High
cufflinks 0.848        
cufflinks 1.376        
cufflinks 27.418     High High
cufflinks 0.428       Low
cufflinks 29.534     High High

0 Strain