Gene : Glyma.13G005500 G. max Wm82.a2.v1
Defline:  (1 of 36) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  55
Name:  ? Glyma.13G005500 Secondary Identifier:  ? PAC:30506107
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G005500 0.5kb upstream 0.5kb upstream 2653 true Chr13: 1632301-1634953 Glycine max
Glyma.13G005500 0.5kb upstream 0.5kb upstream 500 false Chr13: 1632301-1632800 Glycine max
Glyma.13G005500 0.5kb downstream 0.5kb downstream 2653 true Chr13: 1632801-1635453 Glycine max
Glyma.13G005500 0.5kb downstream 0.5kb downstream 500 false Chr13: 1634954-1635453 Glycine max
Glyma.13G005500 1.0kb upstream 1.0kb upstream 3153 true Chr13: 1631801-1634953 Glycine max
Glyma.13G005500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1631801-1632800 Glycine max
Glyma.13G005500 1.0kb downstream 1.0kb downstream 3153 true Chr13: 1632801-1635953 Glycine max
Glyma.13G005500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1634954-1635953 Glycine max
Glyma.13G005500 2.0kb upstream 2.0kb upstream 4153 true Chr13: 1630801-1634953 Glycine max
Glyma.13G005500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1630801-1632800 Glycine max
Glyma.13G005500 2.0kb downstream 2.0kb downstream 4153 true Chr13: 1632801-1636953 Glycine max
Glyma.13G005500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1634954-1636953 Glycine max
Glyma.13G005500 5.0kb upstream 5.0kb upstream 7153 true Chr13: 1627801-1634953 Glycine max
Glyma.13G005500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1627801-1632800 Glycine max
Glyma.13G005500 5.0kb downstream 5.0kb downstream 7153 true Chr13: 1632801-1639953 Glycine max
Glyma.13G005500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1634954-1639953 Glycine max
Glyma.13G005500 10.0kb upstream 10.0kb upstream 12153 true Chr13: 1622801-1634953 Glycine max
Glyma.13G005500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1622801-1632800 Glycine max
Glyma.13G005500 10.0kb downstream 10.0kb downstream 12153 true Chr13: 1632801-1644953 Glycine max
Glyma.13G005500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1634954-1644953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.7673 0.0 60.8228 High Low
cufflinks 200.736 0.0 663.756 High  
cufflinks 264.379 0.0 931.205 High  
cufflinks 406.039 0.0 1623.59 High  
cufflinks 352.191 0.0 1364.09 High  
cufflinks 27.5516 0.0 73.5153 High Low
cufflinks 218.448 0.0 746.876 High  
cufflinks 510.197 0.0 2234.07 High  
cufflinks 531.196 0.0 2363.24 High  
cufflinks 57.5     High  
cufflinks 6.099     High Low
cufflinks 116.256     High High
cufflinks 50.23     High  
cufflinks 93.971     High High
cufflinks 48.157     High  
cufflinks 24.594     High  
cufflinks 48.2     High  
cufflinks 117.989     High High
cufflinks 90.169     High  
cufflinks 7.678     High Low
cufflinks 69.362     High  
cufflinks 14.03     High Low
cufflinks 25.657     High  
cufflinks 50.147     High  
cufflinks 13.847     High Low
cufflinks 22.705     High  

0 Strain