Gene : Glyma.13G006500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR35708:SF1 - GB Genomic Order:  65
Name:  ? Glyma.13G006500 Secondary Identifier:  ? PAC:30505743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G006500 0.5kb upstream 0.5kb upstream 1945 true Chr13: 1886280-1888224 Glycine max
Glyma.13G006500 0.5kb upstream 0.5kb upstream 500 false Chr13: 1886280-1886779 Glycine max
Glyma.13G006500 0.5kb downstream 0.5kb downstream 1945 true Chr13: 1886780-1888724 Glycine max
Glyma.13G006500 0.5kb downstream 0.5kb downstream 500 false Chr13: 1888225-1888724 Glycine max
Glyma.13G006500 1.0kb upstream 1.0kb upstream 2445 true Chr13: 1885780-1888224 Glycine max
Glyma.13G006500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1885780-1886779 Glycine max
Glyma.13G006500 1.0kb downstream 1.0kb downstream 2445 true Chr13: 1886780-1889224 Glycine max
Glyma.13G006500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1888225-1889224 Glycine max
Glyma.13G006500 2.0kb upstream 2.0kb upstream 3445 true Chr13: 1884780-1888224 Glycine max
Glyma.13G006500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1884780-1886779 Glycine max
Glyma.13G006500 2.0kb downstream 2.0kb downstream 3445 true Chr13: 1886780-1890224 Glycine max
Glyma.13G006500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1888225-1890224 Glycine max
Glyma.13G006500 5.0kb upstream 5.0kb upstream 6445 true Chr13: 1881780-1888224 Glycine max
Glyma.13G006500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1881780-1886779 Glycine max
Glyma.13G006500 5.0kb downstream 5.0kb downstream 6445 true Chr13: 1886780-1893224 Glycine max
Glyma.13G006500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1888225-1893224 Glycine max
Glyma.13G006500 10.0kb upstream 10.0kb upstream 11445 true Chr13: 1876780-1888224 Glycine max
Glyma.13G006500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1876780-1886779 Glycine max
Glyma.13G006500 10.0kb downstream 10.0kb downstream 11445 true Chr13: 1886780-1898224 Glycine max
Glyma.13G006500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1888225-1898224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302802 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0743808 0.0 0.303013 Low Low
cufflinks 0.874451 0.0 3.20071    
cufflinks 0.187671 0.0 0.735545 Low Low
cufflinks 0.41778 0.0 1.58457    
cufflinks 1.57893 0.0 5.57248    
cufflinks 2.12893 0.0 7.2973    
cufflinks 0.52641 0.0 1.98071    
cufflinks 3.02268 0.0 9.88027   High
cufflinks 2.68614 0.0 8.94814   High
cufflinks 0.741        
cufflinks 0.26        
cufflinks 0.286        
cufflinks 4.005       High
cufflinks 1.51       High
cufflinks 0.013     Low Low
cufflinks 0.653        
cufflinks 0.25        
cufflinks 0.285        
cufflinks 0.237        
cufflinks 0.828        
cufflinks 0.356        
cufflinks 0.845        
cufflinks 0.476        
cufflinks 0.291        
cufflinks 0.873        
cufflinks 0.257        

0 Strain