Gene : Glyma.13G007400 G. max Wm82.a2.v1
Defline:  (1 of 10) PF16719 - SAWADEE domain (SAWADEE) Genomic Order:  74
Name:  ? Glyma.13G007400 Secondary Identifier:  ? PAC:30505438
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G007400 0.5kb upstream 0.5kb upstream 20538 true Chr13: 2009392-2029929 Glycine max
Glyma.13G007400 0.5kb upstream 0.5kb upstream 500 false Chr13: 2029430-2029929 Glycine max
Glyma.13G007400 0.5kb downstream 0.5kb downstream 20538 true Chr13: 2008892-2029429 Glycine max
Glyma.13G007400 0.5kb downstream 0.5kb downstream 500 false Chr13: 2008892-2009391 Glycine max
Glyma.13G007400 1.0kb upstream 1.0kb upstream 21038 true Chr13: 2009392-2030429 Glycine max
Glyma.13G007400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2029430-2030429 Glycine max
Glyma.13G007400 1.0kb downstream 1.0kb downstream 21038 true Chr13: 2008392-2029429 Glycine max
Glyma.13G007400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2008392-2009391 Glycine max
Glyma.13G007400 2.0kb upstream 2.0kb upstream 22038 true Chr13: 2009392-2031429 Glycine max
Glyma.13G007400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2029430-2031429 Glycine max
Glyma.13G007400 2.0kb downstream 2.0kb downstream 22038 true Chr13: 2007392-2029429 Glycine max
Glyma.13G007400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2007392-2009391 Glycine max
Glyma.13G007400 5.0kb upstream 5.0kb upstream 25038 true Chr13: 2009392-2034429 Glycine max
Glyma.13G007400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2029430-2034429 Glycine max
Glyma.13G007400 5.0kb downstream 5.0kb downstream 25038 true Chr13: 2004392-2029429 Glycine max
Glyma.13G007400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2004392-2009391 Glycine max
Glyma.13G007400 10.0kb upstream 10.0kb upstream 30038 true Chr13: 2009392-2039429 Glycine max
Glyma.13G007400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2029430-2039429 Glycine max
Glyma.13G007400 10.0kb downstream 10.0kb downstream 30038 true Chr13: 1999392-2029429 Glycine max
Glyma.13G007400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1999392-2009391 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311523 5265 Fabidae View MSA
124071604 5270 Rosid View MSA
123747954 5271 Pentapetalae View MSA
122794799 5272 Eudicot View MSA
122048875 5273 Angiosperm View MSA
121350167 5274 Embryophyte View MSA
123381602 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71664 0.0 6.35748    
cufflinks 1.6643 0.0 6.23741    
cufflinks 1.07749 0.0 4.64284   Low
cufflinks 1.15222 0.0 4.9304   Low
cufflinks 1.70159 0.0 6.31527    
cufflinks 1.47862 0.0 5.81429    
cufflinks 2.51136 0.0 8.51282   High
cufflinks 1.19047 0.0 5.02746    
cufflinks 1.77712 0.0 6.5376    
cufflinks 0.115        
cufflinks 0.099        
cufflinks 0.176        
cufflinks 0.197       High
cufflinks 0.276       High
cufflinks 0.124        
cufflinks 0.122        
cufflinks 0.103        
cufflinks 0.169        
cufflinks 0.251       High
cufflinks 0.093     Low Low
cufflinks 0.101        
cufflinks 0.144        
cufflinks 0.166        
cufflinks 0.122        
cufflinks 0.09     Low Low
cufflinks 0.141        

0 Strain