Gene : Glyma.12G242000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  2420
Name:  ? Glyma.12G242000 Secondary Identifier:  ? PAC:30545587
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G242000 0.5kb upstream 0.5kb upstream 6031 true Chr12: 40042233-40048263 Glycine max
Glyma.12G242000 0.5kb upstream 0.5kb upstream 500 false Chr12: 40047764-40048263 Glycine max
Glyma.12G242000 0.5kb downstream 0.5kb downstream 6031 true Chr12: 40041733-40047763 Glycine max
Glyma.12G242000 0.5kb downstream 0.5kb downstream 500 false Chr12: 40041733-40042232 Glycine max
Glyma.12G242000 1.0kb upstream 1.0kb upstream 6531 true Chr12: 40042233-40048763 Glycine max
Glyma.12G242000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 40047764-40048763 Glycine max
Glyma.12G242000 1.0kb downstream 1.0kb downstream 6531 true Chr12: 40041233-40047763 Glycine max
Glyma.12G242000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 40041233-40042232 Glycine max
Glyma.12G242000 2.0kb upstream 2.0kb upstream 7531 true Chr12: 40042233-40049763 Glycine max
Glyma.12G242000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 40047764-40049763 Glycine max
Glyma.12G242000 2.0kb downstream 2.0kb downstream 7531 true Chr12: 40040233-40047763 Glycine max
Glyma.12G242000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 40040233-40042232 Glycine max
Glyma.12G242000 5.0kb upstream 5.0kb upstream 10531 true Chr12: 40042233-40052763 Glycine max
Glyma.12G242000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 40047764-40052763 Glycine max
Glyma.12G242000 5.0kb downstream 5.0kb downstream 10531 true Chr12: 40037233-40047763 Glycine max
Glyma.12G242000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 40037233-40042232 Glycine max
Glyma.12G242000 10.0kb upstream 10.0kb upstream 15531 true Chr12: 40042233-40057763 Glycine max
Glyma.12G242000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 40047764-40057763 Glycine max
Glyma.12G242000 10.0kb downstream 10.0kb downstream 15531 true Chr12: 40032233-40047763 Glycine max
Glyma.12G242000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 40032233-40042232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307184 5265 Fabidae View MSA
124063753 5270 Rosid View MSA
123741848 5271 Pentapetalae View MSA
122790335 5272 Eudicot View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2161 0.0 55.1236    
cufflinks 17.0373 0.0 52.0495    
cufflinks 19.6563 0.0 58.9599    
cufflinks 18.6022 0.0 56.1772    
cufflinks 19.2818 0.0 58.1125    
cufflinks 32.7745 0.0 97.6775 High High
cufflinks 17.5486 0.0 53.3679    
cufflinks 24.7021 0.0 73.7462 High  
cufflinks 17.4425 0.0 53.0696    
cufflinks 6.185        
cufflinks 5.33        
cufflinks 3.974        
cufflinks 6.518        
cufflinks 7.298     High High
cufflinks 2.887       Low
cufflinks 4.289        
cufflinks 6.549     High High
cufflinks 4.834        
cufflinks 4.622        
cufflinks 3.796       Low
cufflinks 5.489        
cufflinks 4.098        
cufflinks 4.786        
cufflinks 7.21     High High
cufflinks 3.722       Low
cufflinks 6.364     High  

0 Strain