Gene : Glyma.13G002400 G. max Wm82.a2.v1
Genomic Order:  24 Name:  ? Glyma.13G002400
Secondary Identifier:  ? PAC:30501206
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G002400 0.5kb upstream 0.5kb upstream 4072 true Chr13: 675036-679107 Glycine max
Glyma.13G002400 0.5kb upstream 0.5kb upstream 500 false Chr13: 678608-679107 Glycine max
Glyma.13G002400 0.5kb downstream 0.5kb downstream 4072 true Chr13: 674536-678607 Glycine max
Glyma.13G002400 0.5kb downstream 0.5kb downstream 500 false Chr13: 674536-675035 Glycine max
Glyma.13G002400 1.0kb upstream 1.0kb upstream 4572 true Chr13: 675036-679607 Glycine max
Glyma.13G002400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 678608-679607 Glycine max
Glyma.13G002400 1.0kb downstream 1.0kb downstream 4572 true Chr13: 674036-678607 Glycine max
Glyma.13G002400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 674036-675035 Glycine max
Glyma.13G002400 2.0kb upstream 2.0kb upstream 5572 true Chr13: 675036-680607 Glycine max
Glyma.13G002400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 678608-680607 Glycine max
Glyma.13G002400 2.0kb downstream 2.0kb downstream 5572 true Chr13: 673036-678607 Glycine max
Glyma.13G002400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 673036-675035 Glycine max
Glyma.13G002400 5.0kb upstream 5.0kb upstream 8572 true Chr13: 675036-683607 Glycine max
Glyma.13G002400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 678608-683607 Glycine max
Glyma.13G002400 5.0kb downstream 5.0kb downstream 8572 true Chr13: 670036-678607 Glycine max
Glyma.13G002400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 670036-675035 Glycine max
Glyma.13G002400 10.0kb upstream 10.0kb upstream 13572 true Chr13: 675036-688607 Glycine max
Glyma.13G002400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 678608-688607 Glycine max
Glyma.13G002400 10.0kb downstream 10.0kb downstream 13572 true Chr13: 665036-678607 Glycine max
Glyma.13G002400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 665036-675035 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240851 5265 Fabidae Singleton cluster - no MSA
124067762 5270 Rosid View MSA
123738724 5271 Pentapetalae View MSA
122787943 5272 Eudicot View MSA
122041887 5273 Angiosperm View MSA
121348905 5274 Embryophyte View MSA
123381070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.07458 0.0 19.9561    
cufflinks 6.68605 0.0 18.9696    
cufflinks 4.59509 0.0 13.6869    
cufflinks 6.45966 0.0 18.3704    
cufflinks 9.51816 0.0 26.1047    
cufflinks 4.97599 0.0 14.6148    
cufflinks 24.8232 0.0 66.3681 High High
cufflinks 4.98329 0.0 14.6415    
cufflinks 5.98053 0.0 17.1786    
cufflinks 2.531       Low
cufflinks 3.052        
cufflinks 2.965        
cufflinks 5.131       High
cufflinks 8.175     High High
cufflinks 2.634        
cufflinks 3.2        
cufflinks 2.954        
cufflinks 3.233        
cufflinks 3.723        
cufflinks 3.592        
cufflinks 2.903        
cufflinks 3.069        
cufflinks 3.298        
cufflinks 2.758        
cufflinks 3.22        
cufflinks 3.348        

0 Strain