Gene : Glyma.13G003400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF6 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  34
Name:  ? Glyma.13G003400 Secondary Identifier:  ? PAC:30504019
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G003400 0.5kb upstream 0.5kb upstream 8761 true Chr13: 935739-944499 Glycine max
Glyma.13G003400 0.5kb upstream 0.5kb upstream 500 false Chr13: 935739-936238 Glycine max
Glyma.13G003400 0.5kb downstream 0.5kb downstream 8761 true Chr13: 936239-944999 Glycine max
Glyma.13G003400 0.5kb downstream 0.5kb downstream 500 false Chr13: 944500-944999 Glycine max
Glyma.13G003400 1.0kb upstream 1.0kb upstream 9261 true Chr13: 935239-944499 Glycine max
Glyma.13G003400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 935239-936238 Glycine max
Glyma.13G003400 1.0kb downstream 1.0kb downstream 9261 true Chr13: 936239-945499 Glycine max
Glyma.13G003400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 944500-945499 Glycine max
Glyma.13G003400 2.0kb upstream 2.0kb upstream 10261 true Chr13: 934239-944499 Glycine max
Glyma.13G003400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 934239-936238 Glycine max
Glyma.13G003400 2.0kb downstream 2.0kb downstream 10261 true Chr13: 936239-946499 Glycine max
Glyma.13G003400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 944500-946499 Glycine max
Glyma.13G003400 5.0kb upstream 5.0kb upstream 13261 true Chr13: 931239-944499 Glycine max
Glyma.13G003400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 931239-936238 Glycine max
Glyma.13G003400 5.0kb downstream 5.0kb downstream 13261 true Chr13: 936239-949499 Glycine max
Glyma.13G003400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 944500-949499 Glycine max
Glyma.13G003400 10.0kb upstream 10.0kb upstream 18261 true Chr13: 926239-944499 Glycine max
Glyma.13G003400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 926239-936238 Glycine max
Glyma.13G003400 10.0kb downstream 10.0kb downstream 18261 true Chr13: 936239-954499 Glycine max
Glyma.13G003400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 944500-954499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300066 5265 Fabidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.97975 0.0 44.9071    
cufflinks 5.3303 0.0 26.0875    
cufflinks 15.1723 0.0 69.1326   High
cufflinks 5.02024 0.0 26.8139    
cufflinks 3.00147 0.0 17.3545   Low
cufflinks 10.8757 0.0 50.7288   High
cufflinks 3.91539 0.0 21.971    
cufflinks 4.43957 0.0 26.7914    
cufflinks 4.96304 0.0 24.5392    
cufflinks 0.15       Low
cufflinks 0.487       High
cufflinks 0.371        
cufflinks 0.146       Low
cufflinks 0.078       Low
cufflinks 0.275        
cufflinks 0.237        
cufflinks 0.53       High
cufflinks 0.216        
cufflinks 0.189        
cufflinks 0.244        
cufflinks 0.413        
cufflinks 0.268        
cufflinks 0.18        
cufflinks 0.596       High
cufflinks 0.23        
cufflinks 0.583       High

0 Strain