Gene : Glyma.12G237300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  2373
Name:  ? Glyma.12G237300 Secondary Identifier:  ? PAC:30548141
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G237300 0.5kb upstream 0.5kb upstream 6728 true Chr12: 39612225-39618952 Glycine max
Glyma.12G237300 0.5kb upstream 0.5kb upstream 500 false Chr12: 39612225-39612724 Glycine max
Glyma.12G237300 0.5kb downstream 0.5kb downstream 6728 true Chr12: 39612725-39619452 Glycine max
Glyma.12G237300 0.5kb downstream 0.5kb downstream 500 false Chr12: 39618953-39619452 Glycine max
Glyma.12G237300 1.0kb upstream 1.0kb upstream 7228 true Chr12: 39611725-39618952 Glycine max
Glyma.12G237300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39611725-39612724 Glycine max
Glyma.12G237300 1.0kb downstream 1.0kb downstream 7228 true Chr12: 39612725-39619952 Glycine max
Glyma.12G237300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39618953-39619952 Glycine max
Glyma.12G237300 2.0kb upstream 2.0kb upstream 8228 true Chr12: 39610725-39618952 Glycine max
Glyma.12G237300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39610725-39612724 Glycine max
Glyma.12G237300 2.0kb downstream 2.0kb downstream 8228 true Chr12: 39612725-39620952 Glycine max
Glyma.12G237300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39618953-39620952 Glycine max
Glyma.12G237300 5.0kb upstream 5.0kb upstream 11228 true Chr12: 39607725-39618952 Glycine max
Glyma.12G237300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39607725-39612724 Glycine max
Glyma.12G237300 5.0kb downstream 5.0kb downstream 11228 true Chr12: 39612725-39623952 Glycine max
Glyma.12G237300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39618953-39623952 Glycine max
Glyma.12G237300 10.0kb upstream 10.0kb upstream 16228 true Chr12: 39602725-39618952 Glycine max
Glyma.12G237300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39602725-39612724 Glycine max
Glyma.12G237300 10.0kb downstream 10.0kb downstream 16228 true Chr12: 39612725-39628952 Glycine max
Glyma.12G237300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39618953-39628952 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298884 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.7383 0.0 95.8669 High  
cufflinks 35.2157 0.0 154.759 High High
cufflinks 24.5635 0.0 94.672 High  
cufflinks 39.2681 0.0 150.771 High High
cufflinks 23.727 0.0 79.2854 High  
cufflinks 16.9842 0.0 53.315   Low
cufflinks 16.5441 0.0 51.4751   Low
cufflinks 26.0124 0.0 88.7971 High  
cufflinks 23.4787 0.0 92.2016 High  
cufflinks 4.301        
cufflinks 3.108        
cufflinks 10.996     High  
cufflinks 5.763        
cufflinks 5.804        
cufflinks 3.132        
cufflinks 12.926     High High
cufflinks 1.526       Low
cufflinks 11.329     High  
cufflinks 12.52     High  
cufflinks 13.925     High High
cufflinks 2.655       Low
cufflinks 13.367     High High
cufflinks 9.845     High  
cufflinks 3.583        
cufflinks 12.464     High  
cufflinks 2.148       Low

0 Strain