Gene : Glyma.12G237700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  2377
Name:  ? Glyma.12G237700 Secondary Identifier:  ? PAC:30545873
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G237700 0.5kb upstream 0.5kb upstream 7865 true Chr12: 39662181-39670045 Glycine max
Glyma.12G237700 0.5kb upstream 0.5kb upstream 500 false Chr12: 39669546-39670045 Glycine max
Glyma.12G237700 0.5kb downstream 0.5kb downstream 7865 true Chr12: 39661681-39669545 Glycine max
Glyma.12G237700 0.5kb downstream 0.5kb downstream 500 false Chr12: 39661681-39662180 Glycine max
Glyma.12G237700 1.0kb upstream 1.0kb upstream 8365 true Chr12: 39662181-39670545 Glycine max
Glyma.12G237700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39669546-39670545 Glycine max
Glyma.12G237700 1.0kb downstream 1.0kb downstream 8365 true Chr12: 39661181-39669545 Glycine max
Glyma.12G237700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39661181-39662180 Glycine max
Glyma.12G237700 2.0kb upstream 2.0kb upstream 9365 true Chr12: 39662181-39671545 Glycine max
Glyma.12G237700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39669546-39671545 Glycine max
Glyma.12G237700 2.0kb downstream 2.0kb downstream 9365 true Chr12: 39660181-39669545 Glycine max
Glyma.12G237700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39660181-39662180 Glycine max
Glyma.12G237700 5.0kb upstream 5.0kb upstream 12365 true Chr12: 39662181-39674545 Glycine max
Glyma.12G237700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39669546-39674545 Glycine max
Glyma.12G237700 5.0kb downstream 5.0kb downstream 12365 true Chr12: 39657181-39669545 Glycine max
Glyma.12G237700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39657181-39662180 Glycine max
Glyma.12G237700 10.0kb upstream 10.0kb upstream 17365 true Chr12: 39662181-39679545 Glycine max
Glyma.12G237700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39669546-39679545 Glycine max
Glyma.12G237700 10.0kb downstream 10.0kb downstream 17365 true Chr12: 39652181-39669545 Glycine max
Glyma.12G237700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39652181-39662180 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313897 5265 Fabidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.00936 0.0 34.9765    
cufflinks 9.44911 0.0 38.9048    
cufflinks 9.43917 0.0 40.6426    
cufflinks 10.0995 0.0 41.2485    
cufflinks 7.22901 0.0 32.1455    
cufflinks 5.47867 0.0 27.1039   Low
cufflinks 16.5706 0.0 64.1315   High
cufflinks 8.21807 0.0 35.5179    
cufflinks 8.37205 0.0 29.7611    
cufflinks 0.437        
cufflinks 0.373       Low
cufflinks 0.608        
cufflinks 0.375       Low
cufflinks 0.492        
cufflinks 0.494        
cufflinks 0.653        
cufflinks 0.275       Low
cufflinks 0.565        
cufflinks 0.715       High
cufflinks 0.662        
cufflinks 0.46        
cufflinks 0.694       High
cufflinks 0.746       High
cufflinks 0.506        
cufflinks 0.597        
cufflinks 0.334       Low

0 Strain