Gene : Glyma.12G237900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF374 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2379
Name:  ? Glyma.12G237900 Secondary Identifier:  ? PAC:30545702
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2229 Glycine max pathologic  
Gmax PWY-2463 Glycine max pathologic  
Gmax PWY-2464 Glycine max pathologic  
Gmax PWY-2761 Glycine max pathologic  
Gmax PWY-5717 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G237900 0.5kb upstream 0.5kb upstream 2336 true Chr12: 39715462-39717797 Glycine max
Glyma.12G237900 0.5kb upstream 0.5kb upstream 500 false Chr12: 39715462-39715961 Glycine max
Glyma.12G237900 0.5kb downstream 0.5kb downstream 2336 true Chr12: 39715962-39718297 Glycine max
Glyma.12G237900 0.5kb downstream 0.5kb downstream 500 false Chr12: 39717798-39718297 Glycine max
Glyma.12G237900 1.0kb upstream 1.0kb upstream 2836 true Chr12: 39714962-39717797 Glycine max
Glyma.12G237900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39714962-39715961 Glycine max
Glyma.12G237900 1.0kb downstream 1.0kb downstream 2836 true Chr12: 39715962-39718797 Glycine max
Glyma.12G237900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39717798-39718797 Glycine max
Glyma.12G237900 2.0kb upstream 2.0kb upstream 3836 true Chr12: 39713962-39717797 Glycine max
Glyma.12G237900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39713962-39715961 Glycine max
Glyma.12G237900 2.0kb downstream 2.0kb downstream 3836 true Chr12: 39715962-39719797 Glycine max
Glyma.12G237900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39717798-39719797 Glycine max
Glyma.12G237900 5.0kb upstream 5.0kb upstream 6836 true Chr12: 39710962-39717797 Glycine max
Glyma.12G237900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39710962-39715961 Glycine max
Glyma.12G237900 5.0kb downstream 5.0kb downstream 6836 true Chr12: 39715962-39722797 Glycine max
Glyma.12G237900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39717798-39722797 Glycine max
Glyma.12G237900 10.0kb upstream 10.0kb upstream 11836 true Chr12: 39705962-39717797 Glycine max
Glyma.12G237900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39705962-39715961 Glycine max
Glyma.12G237900 10.0kb downstream 10.0kb downstream 11836 true Chr12: 39715962-39727797 Glycine max
Glyma.12G237900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39717798-39727797 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
122314530 5265 Fabidae View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0451378 0.0 0.192798 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0425034 0.0 0.183058 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.006     Low Low
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain