Gene : Glyma.12G238500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15107 - RETINOBLASTOMA BINDING PROTEIN 8 Genomic Order:  2385
Name:  ? Glyma.12G238500 Secondary Identifier:  ? PAC:30546796
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G238500 0.5kb upstream 0.5kb upstream 4186 true Chr12: 39750423-39754608 Glycine max
Glyma.12G238500 0.5kb upstream 0.5kb upstream 500 false Chr12: 39750423-39750922 Glycine max
Glyma.12G238500 0.5kb downstream 0.5kb downstream 4186 true Chr12: 39750923-39755108 Glycine max
Glyma.12G238500 0.5kb downstream 0.5kb downstream 500 false Chr12: 39754609-39755108 Glycine max
Glyma.12G238500 1.0kb upstream 1.0kb upstream 4686 true Chr12: 39749923-39754608 Glycine max
Glyma.12G238500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39749923-39750922 Glycine max
Glyma.12G238500 1.0kb downstream 1.0kb downstream 4686 true Chr12: 39750923-39755608 Glycine max
Glyma.12G238500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39754609-39755608 Glycine max
Glyma.12G238500 2.0kb upstream 2.0kb upstream 5686 true Chr12: 39748923-39754608 Glycine max
Glyma.12G238500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39748923-39750922 Glycine max
Glyma.12G238500 2.0kb downstream 2.0kb downstream 5686 true Chr12: 39750923-39756608 Glycine max
Glyma.12G238500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39754609-39756608 Glycine max
Glyma.12G238500 5.0kb upstream 5.0kb upstream 8686 true Chr12: 39745923-39754608 Glycine max
Glyma.12G238500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39745923-39750922 Glycine max
Glyma.12G238500 5.0kb downstream 5.0kb downstream 8686 true Chr12: 39750923-39759608 Glycine max
Glyma.12G238500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39754609-39759608 Glycine max
Glyma.12G238500 10.0kb upstream 10.0kb upstream 13686 true Chr12: 39740923-39754608 Glycine max
Glyma.12G238500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39740923-39750922 Glycine max
Glyma.12G238500 10.0kb downstream 10.0kb downstream 13686 true Chr12: 39750923-39764608 Glycine max
Glyma.12G238500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39754609-39764608 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313055 5265 Fabidae View MSA
124062434 5270 Rosid View MSA
123738762 5271 Pentapetalae View MSA
122791148 5272 Eudicot View MSA
122042874 5273 Angiosperm View MSA
121349067 5274 Embryophyte View MSA
123426069 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.86463 0.0 21.9734   High
cufflinks 3.61318 0.0 13.3225    
cufflinks 2.96714 0.0 11.6031    
cufflinks 3.6936 0.0 15.9151    
cufflinks 3.17613 0.0 11.9989    
cufflinks 3.27469 0.0 12.3899    
cufflinks 2.76803 0.0 8.52538    
cufflinks 2.49927 0.0 10.2431   Low
cufflinks 2.78458 0.0 11.0518    
cufflinks 0.526       Low
cufflinks 1.051        
cufflinks 1.188        
cufflinks 0.989        
cufflinks 0.969        
cufflinks 1.257        
cufflinks 1.101        
cufflinks 1.443       High
cufflinks 1.018        
cufflinks 1.324        
cufflinks 0.88        
cufflinks 1.26        
cufflinks 1.04        
cufflinks 1.209        
cufflinks 1.251        
cufflinks 0.937        
cufflinks 1.639       High

0 Strain