Gene : Glyma.12G239500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24078//PTHR24078:SF289 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  2395
Name:  ? Glyma.12G239500 Secondary Identifier:  ? PAC:30545828
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G239500 0.5kb upstream 0.5kb upstream 8179 true Chr12: 39830885-39839063 Glycine max
Glyma.12G239500 0.5kb upstream 0.5kb upstream 500 false Chr12: 39838564-39839063 Glycine max
Glyma.12G239500 0.5kb downstream 0.5kb downstream 8179 true Chr12: 39830385-39838563 Glycine max
Glyma.12G239500 0.5kb downstream 0.5kb downstream 500 false Chr12: 39830385-39830884 Glycine max
Glyma.12G239500 1.0kb upstream 1.0kb upstream 8679 true Chr12: 39830885-39839563 Glycine max
Glyma.12G239500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39838564-39839563 Glycine max
Glyma.12G239500 1.0kb downstream 1.0kb downstream 8679 true Chr12: 39829885-39838563 Glycine max
Glyma.12G239500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39829885-39830884 Glycine max
Glyma.12G239500 2.0kb upstream 2.0kb upstream 9679 true Chr12: 39830885-39840563 Glycine max
Glyma.12G239500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39838564-39840563 Glycine max
Glyma.12G239500 2.0kb downstream 2.0kb downstream 9679 true Chr12: 39828885-39838563 Glycine max
Glyma.12G239500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39828885-39830884 Glycine max
Glyma.12G239500 5.0kb upstream 5.0kb upstream 12679 true Chr12: 39830885-39843563 Glycine max
Glyma.12G239500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39838564-39843563 Glycine max
Glyma.12G239500 5.0kb downstream 5.0kb downstream 12679 true Chr12: 39825885-39838563 Glycine max
Glyma.12G239500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39825885-39830884 Glycine max
Glyma.12G239500 10.0kb upstream 10.0kb upstream 17679 true Chr12: 39830885-39848563 Glycine max
Glyma.12G239500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39838564-39848563 Glycine max
Glyma.12G239500 10.0kb downstream 10.0kb downstream 17679 true Chr12: 39820885-39838563 Glycine max
Glyma.12G239500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39820885-39830884 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309798 5265 Fabidae View MSA
124068999 5270 Rosid View MSA
123738793 5271 Pentapetalae View MSA
122792867 5272 Eudicot View MSA
122041939 5273 Angiosperm View MSA
121345452 5274 Embryophyte View MSA
123380218 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.459 0.0 38.6649   High
cufflinks 8.93739 0.0 24.4176    
cufflinks 7.08685 0.0 19.6701    
cufflinks 11.6305 0.0 31.2991    
cufflinks 7.26581 0.0 20.1933    
cufflinks 6.50295 0.0 18.2394   Low
cufflinks 11.0124 0.0 29.7369    
cufflinks 7.80393 0.0 21.5381    
cufflinks 8.60098 0.0 23.5581    
cufflinks 1.499        
cufflinks 0.833       Low
cufflinks 2.381        
cufflinks 1.696        
cufflinks 1.75        
cufflinks 0.732       Low
cufflinks 2.484        
cufflinks 1.483        
cufflinks 2.57        
cufflinks 2.082        
cufflinks 2.61        
cufflinks 0.766       Low
cufflinks 2.491        
cufflinks 2.849       High
cufflinks 0.797       Low
cufflinks 2.535        
cufflinks 1.215        

0 Strain