Gene : Glyma.12G239600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10024:SF236 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  2396
Name:  ? Glyma.12G239600 Secondary Identifier:  ? PAC:30547188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G239600 0.5kb upstream 0.5kb upstream 4043 true Chr12: 39840908-39844950 Glycine max
Glyma.12G239600 0.5kb upstream 0.5kb upstream 500 false Chr12: 39840908-39841407 Glycine max
Glyma.12G239600 0.5kb downstream 0.5kb downstream 4043 true Chr12: 39841408-39845450 Glycine max
Glyma.12G239600 0.5kb downstream 0.5kb downstream 500 false Chr12: 39844951-39845450 Glycine max
Glyma.12G239600 1.0kb upstream 1.0kb upstream 4543 true Chr12: 39840408-39844950 Glycine max
Glyma.12G239600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39840408-39841407 Glycine max
Glyma.12G239600 1.0kb downstream 1.0kb downstream 4543 true Chr12: 39841408-39845950 Glycine max
Glyma.12G239600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39844951-39845950 Glycine max
Glyma.12G239600 2.0kb upstream 2.0kb upstream 5543 true Chr12: 39839408-39844950 Glycine max
Glyma.12G239600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39839408-39841407 Glycine max
Glyma.12G239600 2.0kb downstream 2.0kb downstream 5543 true Chr12: 39841408-39846950 Glycine max
Glyma.12G239600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39844951-39846950 Glycine max
Glyma.12G239600 5.0kb upstream 5.0kb upstream 8543 true Chr12: 39836408-39844950 Glycine max
Glyma.12G239600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39836408-39841407 Glycine max
Glyma.12G239600 5.0kb downstream 5.0kb downstream 8543 true Chr12: 39841408-39849950 Glycine max
Glyma.12G239600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39844951-39849950 Glycine max
Glyma.12G239600 10.0kb upstream 10.0kb upstream 13543 true Chr12: 39831408-39844950 Glycine max
Glyma.12G239600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39831408-39841407 Glycine max
Glyma.12G239600 10.0kb downstream 10.0kb downstream 13543 true Chr12: 39841408-39854950 Glycine max
Glyma.12G239600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39844951-39854950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311480 5265 Fabidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0214421 0.0 0.0873511 Low Low
cufflinks 0.0922017 0.0 0.354508 Low  
cufflinks 0.0466265 0.0 0.184033 Low  
cufflinks 0.130982 0.0 0.495523 Low  
cufflinks 0.120083 0.0 0.456301 Low  
cufflinks 0.0691393 0.0 0.269104 Low  
cufflinks 0.0139644 0.0 0.0583097 Low Low
cufflinks 0.0999403 0.0 0.382296 Low  
cufflinks 0.101088 0.0 0.386972 Low  
cufflinks 0.419       High
cufflinks 0.252        
cufflinks 0.142        
cufflinks 0.361        
cufflinks 0.125        
cufflinks 0.011     Low Low
cufflinks 0.207        
cufflinks 0.095        
cufflinks 0.416       High
cufflinks 0.125        
cufflinks 0.249        
cufflinks 0.183        
cufflinks 0.292        
cufflinks 0.186        
cufflinks 0.112        
cufflinks 0.239        
cufflinks 0.241        

0 Strain