Gene : Glyma.12G240700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24012:SF449 - SPLICING FACTOR 3B SUBUNIT 4 Genomic Order:  2407
Name:  ? Glyma.12G240700 Secondary Identifier:  ? PAC:30545464
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G240700 0.5kb upstream 0.5kb upstream 4846 true Chr12: 39926483-39931328 Glycine max
Glyma.12G240700 0.5kb upstream 0.5kb upstream 500 false Chr12: 39926483-39926982 Glycine max
Glyma.12G240700 0.5kb downstream 0.5kb downstream 4846 true Chr12: 39926983-39931828 Glycine max
Glyma.12G240700 0.5kb downstream 0.5kb downstream 500 false Chr12: 39931329-39931828 Glycine max
Glyma.12G240700 1.0kb upstream 1.0kb upstream 5346 true Chr12: 39925983-39931328 Glycine max
Glyma.12G240700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39925983-39926982 Glycine max
Glyma.12G240700 1.0kb downstream 1.0kb downstream 5346 true Chr12: 39926983-39932328 Glycine max
Glyma.12G240700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39931329-39932328 Glycine max
Glyma.12G240700 2.0kb upstream 2.0kb upstream 6346 true Chr12: 39924983-39931328 Glycine max
Glyma.12G240700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39924983-39926982 Glycine max
Glyma.12G240700 2.0kb downstream 2.0kb downstream 6346 true Chr12: 39926983-39933328 Glycine max
Glyma.12G240700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39931329-39933328 Glycine max
Glyma.12G240700 5.0kb upstream 5.0kb upstream 9346 true Chr12: 39921983-39931328 Glycine max
Glyma.12G240700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39921983-39926982 Glycine max
Glyma.12G240700 5.0kb downstream 5.0kb downstream 9346 true Chr12: 39926983-39936328 Glycine max
Glyma.12G240700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39931329-39936328 Glycine max
Glyma.12G240700 10.0kb upstream 10.0kb upstream 14346 true Chr12: 39916983-39931328 Glycine max
Glyma.12G240700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39916983-39926982 Glycine max
Glyma.12G240700 10.0kb downstream 10.0kb downstream 14346 true Chr12: 39926983-39941328 Glycine max
Glyma.12G240700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39931329-39941328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302196 5265 Fabidae View MSA
124063998 5270 Rosid View MSA
123752165 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2217 0.0 86.8225 High  
cufflinks 28.1821 0.0 75.5047 High  
cufflinks 22.1793 0.0 59.18 High  
cufflinks 38.1289 0.0 103.693 High  
cufflinks 29.1765 0.0 78.3964 High  
cufflinks 15.6672 0.0 41.9475   Low
cufflinks 55.9198 0.0 157.518 High High
cufflinks 22.2361 0.0 59.3435 High  
cufflinks 23.0772 0.0 61.6156 High  
cufflinks 4.381        
cufflinks 2.846       Low
cufflinks 6.598        
cufflinks 5.69        
cufflinks 7.239     High High
cufflinks 2.271       Low
cufflinks 5.165        
cufflinks 4.145        
cufflinks 6.766       High
cufflinks 6.748       High
cufflinks 5.815        
cufflinks 3.297       Low
cufflinks 5.593        
cufflinks 6.12        
cufflinks 3.911        
cufflinks 5.257        
cufflinks 3.774        

0 Strain