Gene : Glyma.12G241200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR32468:SF28 - CATION/H(+) ANTIPORTER 1-RELATED Genomic Order:  2412
Name:  ? Glyma.12G241200 Secondary Identifier:  ? PAC:30546512
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G241200 0.5kb upstream 0.5kb upstream 3316 true Chr12: 39964142-39967457 Glycine max
Glyma.12G241200 0.5kb upstream 0.5kb upstream 500 false Chr12: 39966958-39967457 Glycine max
Glyma.12G241200 0.5kb downstream 0.5kb downstream 3316 true Chr12: 39963642-39966957 Glycine max
Glyma.12G241200 0.5kb downstream 0.5kb downstream 500 false Chr12: 39963642-39964141 Glycine max
Glyma.12G241200 1.0kb upstream 1.0kb upstream 3816 true Chr12: 39964142-39967957 Glycine max
Glyma.12G241200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39966958-39967957 Glycine max
Glyma.12G241200 1.0kb downstream 1.0kb downstream 3816 true Chr12: 39963142-39966957 Glycine max
Glyma.12G241200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39963142-39964141 Glycine max
Glyma.12G241200 2.0kb upstream 2.0kb upstream 4816 true Chr12: 39964142-39968957 Glycine max
Glyma.12G241200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39966958-39968957 Glycine max
Glyma.12G241200 2.0kb downstream 2.0kb downstream 4816 true Chr12: 39962142-39966957 Glycine max
Glyma.12G241200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39962142-39964141 Glycine max
Glyma.12G241200 5.0kb upstream 5.0kb upstream 7816 true Chr12: 39964142-39971957 Glycine max
Glyma.12G241200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39966958-39971957 Glycine max
Glyma.12G241200 5.0kb downstream 5.0kb downstream 7816 true Chr12: 39959142-39966957 Glycine max
Glyma.12G241200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39959142-39964141 Glycine max
Glyma.12G241200 10.0kb upstream 10.0kb upstream 12816 true Chr12: 39964142-39976957 Glycine max
Glyma.12G241200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39966958-39976957 Glycine max
Glyma.12G241200 10.0kb downstream 10.0kb downstream 12816 true Chr12: 39954142-39966957 Glycine max
Glyma.12G241200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39954142-39964141 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310551 5265 Fabidae View MSA
124061275 5270 Rosid View MSA
123738472 5271 Pentapetalae View MSA
122769923 5272 Eudicot View MSA
122048116 5273 Angiosperm View MSA
121310852 5274 Embryophyte View MSA
123348237 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00983078 0.0 0.0444599 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0178637 0.0 0.0764324 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0483479 0.0 0.195039 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.752       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  

0 Strain