Gene : Glyma.13G043900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31279:SF12 - PHI-1-LIKE PROTEIN Genomic Order:  439
Name:  ? Glyma.13G043900 Secondary Identifier:  ? PAC:30505490
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G043900 0.5kb upstream 0.5kb upstream 2620 true Chr13: 13723276-13725895 Glycine max
Glyma.13G043900 0.5kb upstream 0.5kb upstream 500 false Chr13: 13725396-13725895 Glycine max
Glyma.13G043900 0.5kb downstream 0.5kb downstream 2620 true Chr13: 13722776-13725395 Glycine max
Glyma.13G043900 0.5kb downstream 0.5kb downstream 500 false Chr13: 13722776-13723275 Glycine max
Glyma.13G043900 1.0kb upstream 1.0kb upstream 3120 true Chr13: 13723276-13726395 Glycine max
Glyma.13G043900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13725396-13726395 Glycine max
Glyma.13G043900 1.0kb downstream 1.0kb downstream 3120 true Chr13: 13722276-13725395 Glycine max
Glyma.13G043900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13722276-13723275 Glycine max
Glyma.13G043900 2.0kb upstream 2.0kb upstream 4120 true Chr13: 13723276-13727395 Glycine max
Glyma.13G043900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13725396-13727395 Glycine max
Glyma.13G043900 2.0kb downstream 2.0kb downstream 4120 true Chr13: 13721276-13725395 Glycine max
Glyma.13G043900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13721276-13723275 Glycine max
Glyma.13G043900 5.0kb upstream 5.0kb upstream 7120 true Chr13: 13723276-13730395 Glycine max
Glyma.13G043900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13725396-13730395 Glycine max
Glyma.13G043900 5.0kb downstream 5.0kb downstream 7120 true Chr13: 13718276-13725395 Glycine max
Glyma.13G043900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13718276-13723275 Glycine max
Glyma.13G043900 10.0kb upstream 10.0kb upstream 12120 true Chr13: 13723276-13735395 Glycine max
Glyma.13G043900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13725396-13735395 Glycine max
Glyma.13G043900 10.0kb downstream 10.0kb downstream 12120 true Chr13: 13713276-13725395 Glycine max
Glyma.13G043900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13713276-13723275 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791521 5272 Eudicot View MSA
122304437 5265 Fabidae View MSA
124070844 5270 Rosid View MSA
123746881 5271 Pentapetalae View MSA
122046838 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.6199 0.0 131.545 High  
cufflinks 15.0608 0.0 40.2216    
cufflinks 78.8379 0.0 237.693 High High
cufflinks 41.8874 0.0 116.686 High  
cufflinks 14.9404 0.0 39.8777    
cufflinks 24.1774 0.0 64.9663 High  
cufflinks 8.98615 0.0 24.4474   Low
cufflinks 16.8134 0.0 44.8605    
cufflinks 16.27 0.0 43.4102    
cufflinks 35.176     High  
cufflinks 73.252     High  
cufflinks 52.022     High  
cufflinks 9.459     High  
cufflinks 2.296       Low
cufflinks 53.561     High  
cufflinks 15.055     High  
cufflinks 196.368     High High
cufflinks 12.757     High  
cufflinks 14.057     High  
cufflinks 12.388     High  
cufflinks 119.513     High High
cufflinks 9.012     High  
cufflinks 15.202     High  
cufflinks 81.008     High  
cufflinks 11.422     High  
cufflinks 94.958     High High

0 Strain