Gene : Glyma.13G044200 G. max Wm82.a2.v1
Defline:  (1 of 14) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  442
Name:  ? Glyma.13G044200 Secondary Identifier:  ? PAC:30501801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G044200 0.5kb upstream 0.5kb upstream 3253 true Chr13: 13768892-13772144 Glycine max
Glyma.13G044200 0.5kb upstream 0.5kb upstream 500 false Chr13: 13771645-13772144 Glycine max
Glyma.13G044200 0.5kb downstream 0.5kb downstream 3253 true Chr13: 13768392-13771644 Glycine max
Glyma.13G044200 0.5kb downstream 0.5kb downstream 500 false Chr13: 13768392-13768891 Glycine max
Glyma.13G044200 1.0kb upstream 1.0kb upstream 3753 true Chr13: 13768892-13772644 Glycine max
Glyma.13G044200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13771645-13772644 Glycine max
Glyma.13G044200 1.0kb downstream 1.0kb downstream 3753 true Chr13: 13767892-13771644 Glycine max
Glyma.13G044200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13767892-13768891 Glycine max
Glyma.13G044200 2.0kb upstream 2.0kb upstream 4753 true Chr13: 13768892-13773644 Glycine max
Glyma.13G044200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13771645-13773644 Glycine max
Glyma.13G044200 2.0kb downstream 2.0kb downstream 4753 true Chr13: 13766892-13771644 Glycine max
Glyma.13G044200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13766892-13768891 Glycine max
Glyma.13G044200 5.0kb upstream 5.0kb upstream 7753 true Chr13: 13768892-13776644 Glycine max
Glyma.13G044200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13771645-13776644 Glycine max
Glyma.13G044200 5.0kb downstream 5.0kb downstream 7753 true Chr13: 13763892-13771644 Glycine max
Glyma.13G044200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13763892-13768891 Glycine max
Glyma.13G044200 10.0kb upstream 10.0kb upstream 12753 true Chr13: 13768892-13781644 Glycine max
Glyma.13G044200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13771645-13781644 Glycine max
Glyma.13G044200 10.0kb downstream 10.0kb downstream 12753 true Chr13: 13758892-13771644 Glycine max
Glyma.13G044200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13758892-13768891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301776 5265 Fabidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174102 0.0 0.686179 Low  
cufflinks 0.0510763 0.0 0.215161 Low  
cufflinks 0.0213498 0.0 0.10433 Low  
cufflinks 0.0269158 0.0 0.119699 Low  
cufflinks 0.0561958 0.0 0.234974 Low  
cufflinks 0.0324737 0.0 0.145262 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.11852 0.0 6.65365   High
cufflinks 0.0817644 0.0 0.331229 Low  
cufflinks 0.165       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low High
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.007     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.003     Low Low

0 Strain