Gene : Glyma.13G045400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE Genomic Order:  454
Name:  ? Glyma.13G045400 Secondary Identifier:  ? PAC:30501427
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax CALVIN-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G045400 0.5kb upstream 0.5kb upstream 16806 true Chr13: 13924941-13941746 Glycine max
Glyma.13G045400 0.5kb upstream 0.5kb upstream 500 false Chr13: 13924941-13925440 Glycine max
Glyma.13G045400 0.5kb downstream 0.5kb downstream 16806 true Chr13: 13925441-13942246 Glycine max
Glyma.13G045400 0.5kb downstream 0.5kb downstream 500 false Chr13: 13941747-13942246 Glycine max
Glyma.13G045400 1.0kb upstream 1.0kb upstream 17306 true Chr13: 13924441-13941746 Glycine max
Glyma.13G045400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13924441-13925440 Glycine max
Glyma.13G045400 1.0kb downstream 1.0kb downstream 17306 true Chr13: 13925441-13942746 Glycine max
Glyma.13G045400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13941747-13942746 Glycine max
Glyma.13G045400 2.0kb upstream 2.0kb upstream 18306 true Chr13: 13923441-13941746 Glycine max
Glyma.13G045400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13923441-13925440 Glycine max
Glyma.13G045400 2.0kb downstream 2.0kb downstream 18306 true Chr13: 13925441-13943746 Glycine max
Glyma.13G045400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13941747-13943746 Glycine max
Glyma.13G045400 5.0kb upstream 5.0kb upstream 21306 true Chr13: 13920441-13941746 Glycine max
Glyma.13G045400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13920441-13925440 Glycine max
Glyma.13G045400 5.0kb downstream 5.0kb downstream 21306 true Chr13: 13925441-13946746 Glycine max
Glyma.13G045400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13941747-13946746 Glycine max
Glyma.13G045400 10.0kb upstream 10.0kb upstream 26306 true Chr13: 13915441-13941746 Glycine max
Glyma.13G045400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13915441-13925440 Glycine max
Glyma.13G045400 10.0kb downstream 10.0kb downstream 26306 true Chr13: 13925441-13951746 Glycine max
Glyma.13G045400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13941747-13951746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299755 5265 Fabidae View MSA
124069828 5270 Rosid View MSA
123742375 5271 Pentapetalae View MSA
122794772 5272 Eudicot View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16275 0.0 13.4837   High
cufflinks 2.17374 0.0 15.3353   High
cufflinks 1.01084 0.0 7.03164    
cufflinks 1.19638 0.0 9.37704    
cufflinks 0.844839 0.0 7.09118   Low
cufflinks 0.638256 0.0 3.72238   Low
cufflinks 1.60586 0.0 10.4112    
cufflinks 1.58966 0.0 14.3481    
cufflinks 1.33421 0.0 9.95426    
cufflinks 0.086     Low  
cufflinks 0.02     Low  
cufflinks 0.046     Low  
cufflinks 0.025     Low  
cufflinks 0.036     Low  
cufflinks 0.009     Low Low
cufflinks 0.13       High
cufflinks 0.011     Low Low
cufflinks 0.082     Low  
cufflinks 0.049     Low  
cufflinks 0.263       High
cufflinks 0.018     Low  
cufflinks 0.187       High
cufflinks 0.07     Low  
cufflinks 0.013     Low Low
cufflinks 0.19       High
cufflinks 0.01     Low Low

0 Strain