Gene : Glyma.13G045500 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11945:SF176 - PROTEIN AGAMOUS-LIKE 82 Genomic Order:  455
Name:  ? Glyma.13G045500 Secondary Identifier:  ? PAC:30501477
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G045500 0.5kb upstream 0.5kb upstream 2284 true Chr13: 13944035-13946318 Glycine max
Glyma.13G045500 0.5kb upstream 0.5kb upstream 500 false Chr13: 13945819-13946318 Glycine max
Glyma.13G045500 0.5kb downstream 0.5kb downstream 2284 true Chr13: 13943535-13945818 Glycine max
Glyma.13G045500 0.5kb downstream 0.5kb downstream 500 false Chr13: 13943535-13944034 Glycine max
Glyma.13G045500 1.0kb upstream 1.0kb upstream 2784 true Chr13: 13944035-13946818 Glycine max
Glyma.13G045500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13945819-13946818 Glycine max
Glyma.13G045500 1.0kb downstream 1.0kb downstream 2784 true Chr13: 13943035-13945818 Glycine max
Glyma.13G045500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13943035-13944034 Glycine max
Glyma.13G045500 2.0kb upstream 2.0kb upstream 3784 true Chr13: 13944035-13947818 Glycine max
Glyma.13G045500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13945819-13947818 Glycine max
Glyma.13G045500 2.0kb downstream 2.0kb downstream 3784 true Chr13: 13942035-13945818 Glycine max
Glyma.13G045500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13942035-13944034 Glycine max
Glyma.13G045500 5.0kb upstream 5.0kb upstream 6784 true Chr13: 13944035-13950818 Glycine max
Glyma.13G045500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13945819-13950818 Glycine max
Glyma.13G045500 5.0kb downstream 5.0kb downstream 6784 true Chr13: 13939035-13945818 Glycine max
Glyma.13G045500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13939035-13944034 Glycine max
Glyma.13G045500 10.0kb upstream 10.0kb upstream 11784 true Chr13: 13944035-13955818 Glycine max
Glyma.13G045500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13945819-13955818 Glycine max
Glyma.13G045500 10.0kb downstream 10.0kb downstream 11784 true Chr13: 13934035-13945818 Glycine max
Glyma.13G045500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13934035-13944034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296792 5265 Fabidae View MSA
124035785 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.5759 0.0 16.342    
cufflinks 3.47855 0.0 10.8456    
cufflinks 8.65197 0.0 23.9882   High
cufflinks 6.94671 0.0 19.7555    
cufflinks 3.49416 0.0 10.9657    
cufflinks 8.8515 0.0 24.6208   High
cufflinks 3.11154 0.0 9.93567   Low
cufflinks 7.83364 0.0 21.9447    
cufflinks 3.09816 0.0 9.83521   Low
cufflinks 4.122        
cufflinks 10.134     High High
cufflinks 7.148        
cufflinks 4.018        
cufflinks 3.666        
cufflinks 6.013     High  
cufflinks 2.393       Low
cufflinks 3.511        
cufflinks 4.61        
cufflinks 3.931        
cufflinks 2.228       Low
cufflinks 7.757     High High
cufflinks 2.777        
cufflinks 1.873       Low
cufflinks 8.827     High High
cufflinks 2.786        
cufflinks 6.801     High  

0 Strain