Gene : Glyma.13G071600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Genomic Order:  716
Name:  ? Glyma.13G071600 Secondary Identifier:  ? PAC:30503896
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G071600 0.5kb upstream 0.5kb upstream 2654 true Chr13: 17176094-17178747 Glycine max
Glyma.13G071600 0.5kb upstream 0.5kb upstream 500 false Chr13: 17176094-17176593 Glycine max
Glyma.13G071600 0.5kb downstream 0.5kb downstream 2654 true Chr13: 17176594-17179247 Glycine max
Glyma.13G071600 0.5kb downstream 0.5kb downstream 500 false Chr13: 17178748-17179247 Glycine max
Glyma.13G071600 1.0kb upstream 1.0kb upstream 3154 true Chr13: 17175594-17178747 Glycine max
Glyma.13G071600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 17175594-17176593 Glycine max
Glyma.13G071600 1.0kb downstream 1.0kb downstream 3154 true Chr13: 17176594-17179747 Glycine max
Glyma.13G071600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 17178748-17179747 Glycine max
Glyma.13G071600 2.0kb upstream 2.0kb upstream 4154 true Chr13: 17174594-17178747 Glycine max
Glyma.13G071600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 17174594-17176593 Glycine max
Glyma.13G071600 2.0kb downstream 2.0kb downstream 4154 true Chr13: 17176594-17180747 Glycine max
Glyma.13G071600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 17178748-17180747 Glycine max
Glyma.13G071600 5.0kb upstream 5.0kb upstream 7154 true Chr13: 17171594-17178747 Glycine max
Glyma.13G071600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 17171594-17176593 Glycine max
Glyma.13G071600 5.0kb downstream 5.0kb downstream 7154 true Chr13: 17176594-17183747 Glycine max
Glyma.13G071600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 17178748-17183747 Glycine max
Glyma.13G071600 10.0kb upstream 10.0kb upstream 12154 true Chr13: 17166594-17178747 Glycine max
Glyma.13G071600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 17166594-17176593 Glycine max
Glyma.13G071600 10.0kb downstream 10.0kb downstream 12154 true Chr13: 17176594-17188747 Glycine max
Glyma.13G071600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 17178748-17188747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
122309765 5265 Fabidae View MSA
124071790 5270 Rosid View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.6155 0.0 25.9166    
cufflinks 6.31329 0.0 17.4712    
cufflinks 4.84172 0.0 13.7027    
cufflinks 9.356 0.0 25.2244    
cufflinks 4.83913 0.0 13.8002    
cufflinks 6.34326 0.0 17.5575    
cufflinks 5.26078 0.0 14.8286    
cufflinks 16.3918 0.0 43.7651   High
cufflinks 5.51652 0.0 15.4569    
cufflinks 10.441     High High
cufflinks 0.699       Low
cufflinks 6.065        
cufflinks 6.092        
cufflinks 4.253        
cufflinks 0.303       Low
cufflinks 4.9        
cufflinks 3.588        
cufflinks 5.597        
cufflinks 7.75     High  
cufflinks 4.666        
cufflinks 1.104       Low
cufflinks 6.249        
cufflinks 5.385        
cufflinks 1.433        
cufflinks 4.565        
cufflinks 0.851       Low

0 Strain