Gene : Glyma.13G071800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11413//PTHR11413:SF50 - CYSTATIN FAMILY MEMBER Genomic Order:  718
Name:  ? Glyma.13G071800 Secondary Identifier:  ? PAC:30505297
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G071800 0.5kb upstream 0.5kb upstream 2481 true Chr13: 17264406-17266886 Glycine max
Glyma.13G071800 0.5kb upstream 0.5kb upstream 500 false Chr13: 17264406-17264905 Glycine max
Glyma.13G071800 0.5kb downstream 0.5kb downstream 2481 true Chr13: 17264906-17267386 Glycine max
Glyma.13G071800 0.5kb downstream 0.5kb downstream 500 false Chr13: 17266887-17267386 Glycine max
Glyma.13G071800 1.0kb upstream 1.0kb upstream 2981 true Chr13: 17263906-17266886 Glycine max
Glyma.13G071800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 17263906-17264905 Glycine max
Glyma.13G071800 1.0kb downstream 1.0kb downstream 2981 true Chr13: 17264906-17267886 Glycine max
Glyma.13G071800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 17266887-17267886 Glycine max
Glyma.13G071800 2.0kb upstream 2.0kb upstream 3981 true Chr13: 17262906-17266886 Glycine max
Glyma.13G071800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 17262906-17264905 Glycine max
Glyma.13G071800 2.0kb downstream 2.0kb downstream 3981 true Chr13: 17264906-17268886 Glycine max
Glyma.13G071800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 17266887-17268886 Glycine max
Glyma.13G071800 5.0kb upstream 5.0kb upstream 6981 true Chr13: 17259906-17266886 Glycine max
Glyma.13G071800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 17259906-17264905 Glycine max
Glyma.13G071800 5.0kb downstream 5.0kb downstream 6981 true Chr13: 17264906-17271886 Glycine max
Glyma.13G071800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 17266887-17271886 Glycine max
Glyma.13G071800 10.0kb upstream 10.0kb upstream 11981 true Chr13: 17254906-17266886 Glycine max
Glyma.13G071800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 17254906-17264905 Glycine max
Glyma.13G071800 10.0kb downstream 10.0kb downstream 11981 true Chr13: 17264906-17276886 Glycine max
Glyma.13G071800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 17266887-17276886 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299356 5265 Fabidae View MSA
124064523 5270 Rosid View MSA
123748423 5271 Pentapetalae View MSA
122772609 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.2879 0.0 166.448 High  
cufflinks 81.9856 0.0 221.178 High  
cufflinks 49.9732 0.0 133.324 High  
cufflinks 112.498 0.0 311.277 High High
cufflinks 45.5709 0.0 121.616 High Low
cufflinks 72.6782 0.0 195.11 High  
cufflinks 88.9559 0.0 241.601 High  
cufflinks 101.283 0.0 277.775 High High
cufflinks 46.3629 0.0 123.729 High Low
cufflinks 48.291     High High
cufflinks 31.935     High  
cufflinks 50.901     High High
cufflinks 21.808     High Low
cufflinks 20.587     High Low
cufflinks 13.656     High Low
cufflinks 34.981     High  
cufflinks 31.13     High  
cufflinks 56.025     High High
cufflinks 40.185     High  
cufflinks 23.239     High  
cufflinks 29.764     High  
cufflinks 29.704     High  
cufflinks 26.229     High  
cufflinks 35.979     High  
cufflinks 30.853     High  
cufflinks 38.39     High  

0 Strain