Gene : Glyma.13G079000 G. max Wm82.a2.v1
Genomic Order:  790 Name:  ? Glyma.13G079000
Secondary Identifier:  ? PAC:30501232
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G079000 0.5kb upstream 0.5kb upstream 3480 true Chr13: 18555485-18558964 Glycine max
Glyma.13G079000 0.5kb upstream 0.5kb upstream 500 false Chr13: 18555485-18555984 Glycine max
Glyma.13G079000 0.5kb downstream 0.5kb downstream 3480 true Chr13: 18555985-18559464 Glycine max
Glyma.13G079000 0.5kb downstream 0.5kb downstream 500 false Chr13: 18558965-18559464 Glycine max
Glyma.13G079000 1.0kb upstream 1.0kb upstream 3980 true Chr13: 18554985-18558964 Glycine max
Glyma.13G079000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 18554985-18555984 Glycine max
Glyma.13G079000 1.0kb downstream 1.0kb downstream 3980 true Chr13: 18555985-18559964 Glycine max
Glyma.13G079000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 18558965-18559964 Glycine max
Glyma.13G079000 2.0kb upstream 2.0kb upstream 4980 true Chr13: 18553985-18558964 Glycine max
Glyma.13G079000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 18553985-18555984 Glycine max
Glyma.13G079000 2.0kb downstream 2.0kb downstream 4980 true Chr13: 18555985-18560964 Glycine max
Glyma.13G079000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 18558965-18560964 Glycine max
Glyma.13G079000 5.0kb upstream 5.0kb upstream 7980 true Chr13: 18550985-18558964 Glycine max
Glyma.13G079000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 18550985-18555984 Glycine max
Glyma.13G079000 5.0kb downstream 5.0kb downstream 7980 true Chr13: 18555985-18563964 Glycine max
Glyma.13G079000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 18558965-18563964 Glycine max
Glyma.13G079000 10.0kb upstream 10.0kb upstream 12980 true Chr13: 18545985-18558964 Glycine max
Glyma.13G079000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 18545985-18555984 Glycine max
Glyma.13G079000 10.0kb downstream 10.0kb downstream 12980 true Chr13: 18555985-18568964 Glycine max
Glyma.13G079000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 18558965-18568964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301763 5265 Fabidae View MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23237 0.0 7.75299   Low
cufflinks 3.78324 0.0 12.3302    
cufflinks 9.21741 0.0 26.6129   High
cufflinks 7.11435 0.0 21.2403    
cufflinks 5.23965 0.0 16.299    
cufflinks 6.89763 0.0 20.6353    
cufflinks 3.38738 0.0 11.2278    
cufflinks 7.83646 0.0 23.0327    
cufflinks 6.22624 0.0 18.8654    
cufflinks 1.723        
cufflinks 2.16       High
cufflinks 2.349       High
cufflinks 1.359        
cufflinks 0.973       Low
cufflinks 0.864       Low
cufflinks 1.07        
cufflinks 1.671        
cufflinks 2.074       High
cufflinks 1.215        
cufflinks 1.302        
cufflinks 1.231        
cufflinks 1.122        
cufflinks 0.924       Low
cufflinks 1.767        
cufflinks 0.996       Low
cufflinks 1.805        

0 Strain