Gene : Glyma.13G080300 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1525 - Sister chromatid cohesion complex Cohesin, subunit PDS5 Genomic Order:  803
Name:  ? Glyma.13G080300 Secondary Identifier:  ? PAC:30505072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G080300 0.5kb upstream 0.5kb upstream 24926 true Chr13: 18678063-18702988 Glycine max
Glyma.13G080300 0.5kb upstream 0.5kb upstream 500 false Chr13: 18702489-18702988 Glycine max
Glyma.13G080300 0.5kb downstream 0.5kb downstream 24926 true Chr13: 18677563-18702488 Glycine max
Glyma.13G080300 0.5kb downstream 0.5kb downstream 500 false Chr13: 18677563-18678062 Glycine max
Glyma.13G080300 1.0kb upstream 1.0kb upstream 25426 true Chr13: 18678063-18703488 Glycine max
Glyma.13G080300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 18702489-18703488 Glycine max
Glyma.13G080300 1.0kb downstream 1.0kb downstream 25426 true Chr13: 18677063-18702488 Glycine max
Glyma.13G080300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 18677063-18678062 Glycine max
Glyma.13G080300 2.0kb upstream 2.0kb upstream 26426 true Chr13: 18678063-18704488 Glycine max
Glyma.13G080300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 18702489-18704488 Glycine max
Glyma.13G080300 2.0kb downstream 2.0kb downstream 26426 true Chr13: 18676063-18702488 Glycine max
Glyma.13G080300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 18676063-18678062 Glycine max
Glyma.13G080300 5.0kb upstream 5.0kb upstream 29426 true Chr13: 18678063-18707488 Glycine max
Glyma.13G080300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 18702489-18707488 Glycine max
Glyma.13G080300 5.0kb downstream 5.0kb downstream 29426 true Chr13: 18673063-18702488 Glycine max
Glyma.13G080300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 18673063-18678062 Glycine max
Glyma.13G080300 10.0kb upstream 10.0kb upstream 34426 true Chr13: 18678063-18712488 Glycine max
Glyma.13G080300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 18702489-18712488 Glycine max
Glyma.13G080300 10.0kb downstream 10.0kb downstream 34426 true Chr13: 18668063-18702488 Glycine max
Glyma.13G080300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 18668063-18678062 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302823 5265 Fabidae View MSA
124050422 5270 Rosid View MSA
123747743 5271 Pentapetalae View MSA
122792250 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09385 0.0 23.7589    
cufflinks 5.18391 0.0 31.1262    
cufflinks 6.11197 0.0 38.996   High
cufflinks 3.24008 0.0 23.1957    
cufflinks 3.29939 0.0 21.4446    
cufflinks 4.55871 0.0 27.2394    
cufflinks 3.61077 0.0 23.7339    
cufflinks 2.67822 0.0 16.3706   Low
cufflinks 4.72759 0.0 29.0465    
cufflinks 0.04     Low  
cufflinks 0.035     Low Low
cufflinks 0.071     Low High
cufflinks 0.061     Low  
cufflinks 0.053     Low  
cufflinks 0.053        
cufflinks 0.058     Low  
cufflinks 0.04     Low  
cufflinks 0.063     Low  
cufflinks 0.101       High
cufflinks 0.045     Low  
cufflinks 0.036     Low Low
cufflinks 0.058     Low  
cufflinks 0.079     Low High
cufflinks 0.044     Low  
cufflinks 0.049     Low  
cufflinks 0.05     Low  

0 Strain