Gene : Glyma.13G066500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  665
Name:  ? Glyma.13G066500 Secondary Identifier:  ? PAC:30500086
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G066500 0.5kb upstream 0.5kb upstream 5735 true Chr13: 16633258-16638992 Glycine max
Glyma.13G066500 0.5kb upstream 0.5kb upstream 500 false Chr13: 16633258-16633757 Glycine max
Glyma.13G066500 0.5kb downstream 0.5kb downstream 5735 true Chr13: 16633758-16639492 Glycine max
Glyma.13G066500 0.5kb downstream 0.5kb downstream 500 false Chr13: 16638993-16639492 Glycine max
Glyma.13G066500 1.0kb upstream 1.0kb upstream 6235 true Chr13: 16632758-16638992 Glycine max
Glyma.13G066500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 16632758-16633757 Glycine max
Glyma.13G066500 1.0kb downstream 1.0kb downstream 6235 true Chr13: 16633758-16639992 Glycine max
Glyma.13G066500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 16638993-16639992 Glycine max
Glyma.13G066500 2.0kb upstream 2.0kb upstream 7235 true Chr13: 16631758-16638992 Glycine max
Glyma.13G066500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 16631758-16633757 Glycine max
Glyma.13G066500 2.0kb downstream 2.0kb downstream 7235 true Chr13: 16633758-16640992 Glycine max
Glyma.13G066500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 16638993-16640992 Glycine max
Glyma.13G066500 5.0kb upstream 5.0kb upstream 10235 true Chr13: 16628758-16638992 Glycine max
Glyma.13G066500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 16628758-16633757 Glycine max
Glyma.13G066500 5.0kb downstream 5.0kb downstream 10235 true Chr13: 16633758-16643992 Glycine max
Glyma.13G066500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 16638993-16643992 Glycine max
Glyma.13G066500 10.0kb upstream 10.0kb upstream 15235 true Chr13: 16623758-16638992 Glycine max
Glyma.13G066500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 16623758-16633757 Glycine max
Glyma.13G066500 10.0kb downstream 10.0kb downstream 15235 true Chr13: 16633758-16648992 Glycine max
Glyma.13G066500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 16638993-16648992 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305359 5265 Fabidae View MSA
124068610 5270 Rosid View MSA
123740803 5271 Pentapetalae View MSA
122792927 5272 Eudicot View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6953 0.0 47.2801    
cufflinks 12.7681 0.0 34.4882   Low
cufflinks 41.0574 0.0 112.379 High High
cufflinks 28.5478 0.0 76.5469 High  
cufflinks 19.5815 0.0 52.2553    
cufflinks 54.642 0.0 153.201 High High
cufflinks 17.453 0.0 46.6532    
cufflinks 25.9917 0.0 69.5342 High  
cufflinks 25.4777 0.0 68.1192 High  
cufflinks 10.41     High  
cufflinks 42.868     High High
cufflinks 11.598     High  
cufflinks 6.663        
cufflinks 6.447        
cufflinks 22.225     High  
cufflinks 4.189        
cufflinks 25.039     High  
cufflinks 7.301     High  
cufflinks 4.149        
cufflinks 3.176       Low
cufflinks 50.593     High High
cufflinks 3.702       Low
cufflinks 4.258        
cufflinks 27.115     High  
cufflinks 3.093       Low
cufflinks 41.171     High High

0 Strain