Gene : Misin01G078700 M. sinensis v7.1
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  787
Name:  ? Misin01G078700 Secondary Identifier:  ? PAC:40460322
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Msinensis GLYSYN-PWY Miscanthus sinensis pathologic  
Msinensis PWY-2161 Miscanthus sinensis pathologic  
Msinensis PWY-3841 Miscanthus sinensis pathologic  
Msinensis SER-GLYSYN-PWY Miscanthus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Misin01G078700 0.5kb upstream 0.5kb upstream 7442 true Chr01: 12926862-12934303 Miscanthus sinensis
Misin01G078700 0.5kb upstream 0.5kb upstream 500 false Chr01: 12926862-12927361 Miscanthus sinensis
Misin01G078700 0.5kb downstream 0.5kb downstream 7442 true Chr01: 12927362-12934803 Miscanthus sinensis
Misin01G078700 0.5kb downstream 0.5kb downstream 500 false Chr01: 12934304-12934803 Miscanthus sinensis
Misin01G078700 1.0kb upstream 1.0kb upstream 7942 true Chr01: 12926362-12934303 Miscanthus sinensis
Misin01G078700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12926362-12927361 Miscanthus sinensis
Misin01G078700 1.0kb downstream 1.0kb downstream 7942 true Chr01: 12927362-12935303 Miscanthus sinensis
Misin01G078700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12934304-12935303 Miscanthus sinensis
Misin01G078700 2.0kb upstream 2.0kb upstream 8942 true Chr01: 12925362-12934303 Miscanthus sinensis
Misin01G078700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12925362-12927361 Miscanthus sinensis
Misin01G078700 2.0kb downstream 2.0kb downstream 8942 true Chr01: 12927362-12936303 Miscanthus sinensis
Misin01G078700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12934304-12936303 Miscanthus sinensis
Misin01G078700 5.0kb upstream 5.0kb upstream 11942 true Chr01: 12922362-12934303 Miscanthus sinensis
Misin01G078700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12922362-12927361 Miscanthus sinensis
Misin01G078700 5.0kb downstream 5.0kb downstream 11942 true Chr01: 12927362-12939303 Miscanthus sinensis
Misin01G078700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12934304-12939303 Miscanthus sinensis
Misin01G078700 10.0kb upstream 10.0kb upstream 16942 true Chr01: 12917362-12934303 Miscanthus sinensis
Misin01G078700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12917362-12927361 Miscanthus sinensis
Misin01G078700 10.0kb downstream 10.0kb downstream 16942 true Chr01: 12927362-12944303 Miscanthus sinensis
Misin01G078700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12934304-12944303 Miscanthus sinensis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187926 5267 Panicoideae View MSA
124570013 5269 Grass View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain