Gene : Glyma.13G067800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12346:SF8 - PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 1-RELATED Genomic Order:  678
Name:  ? Glyma.13G067800 Secondary Identifier:  ? PAC:30500371
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G067800 0.5kb upstream 0.5kb upstream 10764 true Chr13: 16765222-16775985 Glycine max
Glyma.13G067800 0.5kb upstream 0.5kb upstream 500 false Chr13: 16765222-16765721 Glycine max
Glyma.13G067800 0.5kb downstream 0.5kb downstream 10764 true Chr13: 16765722-16776485 Glycine max
Glyma.13G067800 0.5kb downstream 0.5kb downstream 500 false Chr13: 16775986-16776485 Glycine max
Glyma.13G067800 1.0kb upstream 1.0kb upstream 11264 true Chr13: 16764722-16775985 Glycine max
Glyma.13G067800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 16764722-16765721 Glycine max
Glyma.13G067800 1.0kb downstream 1.0kb downstream 11264 true Chr13: 16765722-16776985 Glycine max
Glyma.13G067800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 16775986-16776985 Glycine max
Glyma.13G067800 2.0kb upstream 2.0kb upstream 12264 true Chr13: 16763722-16775985 Glycine max
Glyma.13G067800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 16763722-16765721 Glycine max
Glyma.13G067800 2.0kb downstream 2.0kb downstream 12264 true Chr13: 16765722-16777985 Glycine max
Glyma.13G067800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 16775986-16777985 Glycine max
Glyma.13G067800 5.0kb upstream 5.0kb upstream 15264 true Chr13: 16760722-16775985 Glycine max
Glyma.13G067800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 16760722-16765721 Glycine max
Glyma.13G067800 5.0kb downstream 5.0kb downstream 15264 true Chr13: 16765722-16780985 Glycine max
Glyma.13G067800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 16775986-16780985 Glycine max
Glyma.13G067800 10.0kb upstream 10.0kb upstream 20264 true Chr13: 16755722-16775985 Glycine max
Glyma.13G067800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 16755722-16765721 Glycine max
Glyma.13G067800 10.0kb downstream 10.0kb downstream 20264 true Chr13: 16765722-16785985 Glycine max
Glyma.13G067800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 16775986-16785985 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308995 5265 Fabidae View MSA
124072493 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2156 0.0 70.0275    
cufflinks 12.1259 0.0 49.2795    
cufflinks 25.7711 0.0 116.75 High High
cufflinks 12.5872 0.0 51.7442    
cufflinks 11.1409 0.0 44.7065    
cufflinks 9.4269 0.0 37.1434   Low
cufflinks 15.3152 0.0 64.9042    
cufflinks 11.9793 0.0 43.4346    
cufflinks 19.1311 0.0 86.9006    
cufflinks 2.778        
cufflinks 13.771     High High
cufflinks 4.373        
cufflinks 2.439        
cufflinks 1.9       Low
cufflinks 22.597     High High
cufflinks 3.389        
cufflinks 4.998        
cufflinks 4.337        
cufflinks 3.857        
cufflinks 2.951        
cufflinks 13.525     High High
cufflinks 3.3        
cufflinks 2.732        
cufflinks 11.83     High High
cufflinks 2.978        
cufflinks 10.484     High High

0 Strain