Gene : Glyma.13G070400 G. max Wm82.a2.v1
Defline:  (1 of 6) PF00584 - SecE/Sec61-gamma subunits of protein translocation complex (SecE) Genomic Order:  704
Name:  ? Glyma.13G070400 Secondary Identifier:  ? PAC:30502854
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G070400 0.5kb upstream 0.5kb upstream 5796 true Chr13: 17061823-17067618 Glycine max
Glyma.13G070400 0.5kb upstream 0.5kb upstream 500 false Chr13: 17061823-17062322 Glycine max
Glyma.13G070400 0.5kb downstream 0.5kb downstream 5796 true Chr13: 17062323-17068118 Glycine max
Glyma.13G070400 0.5kb downstream 0.5kb downstream 500 false Chr13: 17067619-17068118 Glycine max
Glyma.13G070400 1.0kb upstream 1.0kb upstream 6296 true Chr13: 17061323-17067618 Glycine max
Glyma.13G070400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 17061323-17062322 Glycine max
Glyma.13G070400 1.0kb downstream 1.0kb downstream 6296 true Chr13: 17062323-17068618 Glycine max
Glyma.13G070400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 17067619-17068618 Glycine max
Glyma.13G070400 2.0kb upstream 2.0kb upstream 7296 true Chr13: 17060323-17067618 Glycine max
Glyma.13G070400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 17060323-17062322 Glycine max
Glyma.13G070400 2.0kb downstream 2.0kb downstream 7296 true Chr13: 17062323-17069618 Glycine max
Glyma.13G070400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 17067619-17069618 Glycine max
Glyma.13G070400 5.0kb upstream 5.0kb upstream 10296 true Chr13: 17057323-17067618 Glycine max
Glyma.13G070400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 17057323-17062322 Glycine max
Glyma.13G070400 5.0kb downstream 5.0kb downstream 10296 true Chr13: 17062323-17072618 Glycine max
Glyma.13G070400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 17067619-17072618 Glycine max
Glyma.13G070400 10.0kb upstream 10.0kb upstream 15296 true Chr13: 17052323-17067618 Glycine max
Glyma.13G070400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 17052323-17062322 Glycine max
Glyma.13G070400 10.0kb downstream 10.0kb downstream 15296 true Chr13: 17062323-17077618 Glycine max
Glyma.13G070400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 17067619-17077618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301035 5265 Fabidae View MSA
124068364 5270 Rosid View MSA
123741624 5271 Pentapetalae View MSA
122794104 5272 Eudicot View MSA
122048579 5273 Angiosperm View MSA
121351446 5274 Embryophyte View MSA
123382170 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.78358 0.0 27.2849    
cufflinks 5.40879 0.0 35.6638    
cufflinks 19.6576 0.0 89.9439   High
cufflinks 5.11015 0.0 37.2683    
cufflinks 5.4211 0.0 35.7535    
cufflinks 4.95285 0.0 24.2915    
cufflinks 3.15684 0.0 17.0855    
cufflinks 4.34943 0.0 26.3478    
cufflinks 3.34269 0.0 18.1353    
cufflinks 0.143        
cufflinks 0.079       Low
cufflinks 0.695       High
cufflinks 0.198        
cufflinks 0.229        
cufflinks 0.069       Low
cufflinks 0.229        
cufflinks 0.07       Low
cufflinks 0.269        
cufflinks 0.209        
cufflinks 0.214        
cufflinks 0.067       Low
cufflinks 0.199        
cufflinks 0.218        
cufflinks 0.062       Low
cufflinks 0.238        
cufflinks 0.098        

0 Strain